Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03205 ATGGCTGCCACTACTTCTTCTTCCACCTGCACCGGCTTCTTCAGTCTCCGATCACCCAACTCCGTCGAGTCCAGGGTCTCCTCCACGCAAGCCTCCTCCGGTTGCGGAAAGTTTGACGGCGTGGCCATGTGGTTCATCAACGGCGTCACAACGGCTTTCTTCGCCTCCTTGAACCGTTGCTCTTGCATTCGCATCGCCACCCAGGAAGACGGCGAAGACGCCAACGACTTGCCGTTGATGCTCAACGACGGAAACCTCCGCCACGACGGTGTCGTTTCAGCCGCCGGCAGCAGGAGAAGGACCGGGAAAGGGAAGAAGAGTGAAGCCCTGATCGTCGTCGACGAGGACTGA 351 0.5926 MAATTSSSTCTGFFSLRSPNSVESRVSSTQASSGCGKFDGVAMWFINGVTTAFFASLNRCSCIRIATQEDGEDANDLPLMLNDGNLRHDGVVSAAGSRRRTGKGKKSEALIVVDED 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03205 116 PANTHER PROTEIN, PUTATIVE-RELATED 28 106 - -
Vimu10g03205 116 MobiDBLite consensus disorder prediction 14 35 - -
Vimu10g03205 116 MobiDBLite consensus disorder prediction 14 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03205 Vimu-Chr10 42518617 42518967 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03205 - - gmx:100797991 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03205 10 42518617 42518967 Vimu10g03205 10 42518617 42518967 ECH
Vimu1g02897 1 41348527 41358356 Vimu10g03205 10 42518617 42518967 PCT