Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03178 ATGGAGAATAGAAATCAGAGTAAAATGAAAGAAACAAAGGCTACAATTATGTTCCTTTGTGTATTTTTTGCATTGTGTATCAGATTCAACGTTCAAGCAAAGCCATTATCAACTGTAGAAACAGAAATTGAAGCTAAATTGAAGCAACTCAACAAGCCTGCTGTCAAAACCATCAAGAGTGAAGATGGAGATATTATTGATTGTGTCAACATTTATGACCAACCTGCTTTTGATCATCCAGCCTTAAAAAACCACACTATTAAGGTGATGCCTGATTATATGTTACAATTGGAAAATTCAAGCACAGTAGAAGAAGATTCAGAGTCACAGATATTTCAGACATGGCAGAAGAGTGGAAGTTGTCCACAAGGAACCATCCCTATTCGTAGAATTCTAAAGGAAGATTTACTCAAAGCTGCTTCTCTCGACAGCTTTGGCCAGAAATTCCCACAACACTTCGATAATTCAACAGGCCAAGAAGACGGATATGTTACCCCAACTCGATCGTCAGCATTTCTTCTAACTCTGGGATTCAACTACATTGGAGCACAAGCAGACATCAACGTTTGGAATCCAAAGGTTGCTCAGACAAACGAGTTCACCACAGCTCAAATTTGGCTCAAGAACAGCAACGATTCCTATTTTTCAAGCGTTGAATCAGGGTGGACGGTGAATCCCAAGCTATATGGTGACAGAGCCACCCGATTTTTCGCCTACTGGACTAGGGATTCATACAGATCAACTGGTTGCTTCGATCTTACATGTTCAGGATTTGTGCAAACAGGGCAAGTAGCGCTTGGTGCTAGCATAGGACCTATATCATCGCCTTACAGAGAACAGTATGAAATTAACGTTGGAATGTTCCTGGAGCCAAATTCGGGAAATTGGTATCTGAAAGTGAAGAACAATATTGCAGTGGGTTATTGGCCAGCTGAAATAGTGGGATTATTGCGACACAGTGCGACATCGGTTGAGTGGGGGGGACAAGTATCAAGCACGAATATAAGAAAGAAAAAGCCTCACACCACAACACAAATGGGTAGTGGAGAGTTTGCAAATGGTCGATATCGGCAAGCATGCTTTATGCGAAACATAAAGATTATGGATTATTCACTTCAGCTTAAGTATCCCAGAGATGTAACTACAGTTTCTCAAGAGCCCTATTGTTACAATACCCTCAATGATGTCAGGCCTGGTGTTGAACCTATGTTTTATTTTGGAGGCCCTGGTCGAGGTCTAGCCTACTGTCAGTAA 1254 0.4123 MENRNQSKMKETKATIMFLCVFFALCIRFNVQAKPLSTVETEIEAKLKQLNKPAVKTIKSEDGDIIDCVNIYDQPAFDHPALKNHTIKVMPDYMLQLENSSTVEEDSESQIFQTWQKSGSCPQGTIPIRRILKEDLLKAASLDSFGQKFPQHFDNSTGQEDGYVTPTRSSAFLLTLGFNYIGAQADINVWNPKVAQTNEFTTAQIWLKNSNDSYFSSVESGWTVNPKLYGDRATRFFAYWTRDSYRSTGCFDLTCSGFVQTGQVALGASIGPISSPYREQYEINVGMFLEPNSGNWYLKVKNNIAVGYWPAEIVGLLRHSATSVEWGGQVSSTNIRKKKPHTTTQMGSGEFANGRYRQACFMRNIKIMDYSLQLKYPRDVTTVSQEPYCYNTLNDVRPGVEPMFYFGGPGRGLAYCQ 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03178 417 Pfam Neprosin 198 409 IPR004314 -
Vimu10g03178 417 Gene3D - 187 302 - -
Vimu10g03178 417 Pfam Neprosin activation peptide 57 152 IPR025521 -
Vimu10g03178 417 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 43 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03178 Vimu-Chr10 42298326 42302119 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03178 - - vun:114164721 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03178 10 42298326 42302119 Vimu10g03178 10 42298326 42302119 ECH