Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03175 ATGAGAGGAGGACAAAGCAACGGGGGCGTTAGGGGAATTGCCTCACCGGACAGGGGTGCGCACGATAAGAGGGGGACCCATAACAACCACCTTAATGACAACAACAAGTCTGCAGCCTCATCGGATACTGCGCACGATAGCAAGAAGGGAGGGTCTCCCTCCGGCAGCGGAGACGCCGCTCCGCCTGTGTGGCCCCCGAAGTTCGTGATTGCCTTGACCAACAAGGAGAAGGAAGAAGATTTTCTCGCCATTAAGGGCTCAAAGCTGCCTCAGAGACCCAAGAAGAGAGCTAAATTCATTCAGCGCACCCTCAATCTCGTTAGTCCTGGTGCATGGTTGTGCGATCTTACCTTGGAACGATACGAGGTTAGGGAGAAGAAAATATCCAAAAAGAGACCAAGAGGTTTGAAAGCAATGGGAAACATGGAGTCTGACTCTGAGAAATGCATGGATTTTGTAAAGCATGGCATGACATCAAAGCTGGATGCCAACTCATCGAAATCAAAATATTAA 513 0.499 MRGGQSNGGVRGIASPDRGAHDKRGTHNNHLNDNNKSAASSDTAHDSKKGGSPSGSGDAAPPVWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFIQRTLNLVSPGAWLCDLTLERYEVREKKISKKRPRGLKAMGNMESDSEKCMDFVKHGMTSKLDANSSKSKY 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03175 170 PANTHER PUTATIVE (DUF1639)-RELATED 21 131 - -
Vimu10g03175 170 MobiDBLite consensus disorder prediction 16 30 - -
Vimu10g03175 170 MobiDBLite consensus disorder prediction 31 50 - -
Vimu10g03175 170 MobiDBLite consensus disorder prediction 1 67 - -
Vimu10g03175 170 Pfam Protein of unknown function (DUF1639) 72 121 IPR012438 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03175 Vimu-Chr10 42273108 42275866 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03175 - - ccaj:109798144 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03175 10 42273108 42275866 Vimu10g03175 10 42273108 42275866 ECH