Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03172 ATGGTAACTATCTTAAAGGATTGCACTGGTGAAGATGTTATTGTTAACAAATTTTTTTCTGCTATATTTGGAAATAAGTCAGCTCTTTGGAGTGTCAGCGGGAAGGTTATGGACAGTGGTCCCAATGATCAAATACTTATATTGTATTCTGGTCATCACCGTCCGGGAGTGCTAGGGGACTTGGTGTTGCCGCATAGTGGAATAGTGACACATTGGTGGTTTGATTTCGTGGGGAGGCGACATCCCCCGCCTGAAAAGAAAAGGAAAAGAAAAAAAGGAGTGAGGAAGAGTGAAGTAGAGAGCGCCGAGCCATTTGTTTTTTTATACGACAGTGTTTCTTCACACCAAATATTTGCTCTTCTCAAGCATGCCTCCGAACTTCTAAAAAGCCTATTTTATGAGTTATGCAATGAATCAGGGAGTATCTTTGAAGGTCTTCTTCCCGAAGGTCTGATAATCTATGCAAAAACATCTGCAAAAGCAGAAGACAGCTGGGTCAAAGAAAGGACCATGACTGGAAATTCAGACTATGGTTCCCACGCGTGCAGTATGGTTCCCACTCTTCTTATATTTGAGGACCACCTTCAAAAGCAGTCGACCAACGTGACGAAGATCTCATCCATTCCTGAGATAAGGTATCATACCGTTGAAGAATAG 657 0.4231 MVTILKDCTGEDVIVNKFFSAIFGNKSALWSVSGKVMDSGPNDQILILYSGHHRPGVLGDLVLPHSGIVTHWWFDFVGRRHPPPEKKRKRKKGVRKSEVESAEPFVFLYDSVSSHQIFALLKHASELLKSLFYELCNESGSIFEGLLPEGLIIYAKTSAKAEDSWVKERTMTGNSDYGSHACSMVPTLLIFEDHLQKQSTNVTKISSIPEIRYHTVEE 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03172 218 Gene3D - 2 203 - -
Vimu10g03172 218 PRINTS Hemoglobinase (C13) cysteine protease signature 7 22 IPR001096 GO:0006508|GO:0008233
Vimu10g03172 218 PRINTS Hemoglobinase (C13) cysteine protease signature 35 54 IPR001096 GO:0006508|GO:0008233
Vimu10g03172 218 PANTHER HEMOGLOBINASE FAMILY MEMBER 5 59 IPR001096 GO:0006508|GO:0008233
Vimu10g03172 218 Pfam Peptidase C13 family 5 59 IPR001096 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03172 Vimu-Chr10 42259866 42262957 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03172 K01369 - aew:130757694 105.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03172 10 42259866 42262957 Vimu10g03172 10 42259866 42262957 ECH