Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03169 ATGGTATATACTGCTGTGGGCTGCCTTGGGATATCTGCATTAAGTGATCTTGTCAGTGAGGTTCTGTACCATCCCAATAGTTTACTCCTGACTCCATTCCTGCGCTGGAGTTTGCTGTCTGTTCTATACCCTTGTTTCTTGTCTCAGTTCCTACTAGTTTTCTGGCATACCCATGCAATTGATTATAATCACACTTGGGTTGGAACCTTTTGTTTGGCACCTTTAAGTCATCCACCCAGCTGCATTCAGGGTCAGCAACTATATAATGATGCGGGGAAGTTACAGGTGGATGCAATACAGGCTTGTGGAGGCCAGAAAACAGCTGATGGTAGACGATTCCGGACAGGGGGTGGCATATTGTGGAGCATCTTAAAAGTTAGGGAACCGAAGAAACAATTCAAGCAGCCTAATGTGACGCAACGACCTGTGCCAAAGAAAGACGATTCTTCTCAAGGAGTGCCCGTGTCATTCTCTGGCAGAGATCAGGGCAATGTTTTGGACAGTGATTTTCATGTTTCCCAGCTGCAAAATAAACATGAACCAGCACCTTCTGAAGAAAAACCTATATCTGTGCATGATAGGTTAAGGATACCAGTATCATATGATGATGATCTGCTGGGAGAGAATCCATTCAATGATGCAACCTGA 648 0.446 MVYTAVGCLGISALSDLVSEVLYHPNSLLLTPFLRWSLLSVLYPCFLSQFLLVFWHTHAIDYNHTWVGTFCLAPLSHPPSCIQGQQLYNDAGKLQVDAIQACGGQKTADGRRFRTGGGILWSILKVREPKKQFKQPNVTQRPVPKKDDSSQGVPVSFSGRDQGNVLDSDFHVSQLQNKHEPAPSEEKPISVHDRLRIPVSYDDDLLGENPFNDAT 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03169 215 MobiDBLite consensus disorder prediction 135 163 - -
Vimu10g03169 215 MobiDBLite consensus disorder prediction 180 194 - -
Vimu10g03169 215 MobiDBLite consensus disorder prediction 132 163 - -
Vimu10g03169 215 PANTHER CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26 1 205 IPR039047 GO:0006408
Vimu10g03169 215 MobiDBLite consensus disorder prediction 175 194 - -
Vimu10g03169 215 Gene3D - 1 148 IPR038092 -
Vimu10g03169 215 Pfam Phosphorylated adapter RNA export protein, RNA-binding domain 95 134 IPR019385 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03169 Vimu-Chr10 42234325 42242012 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03169 K14291 - gmx:100805103 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03169 10 42234325 42242012 Vimu10g03169 10 42234325 42242012 ECH
Vimu1g02851 1 40779811 40783739 Vimu10g03169 10 42234325 42242012 PCT