Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03127 ATGGATCAGTTCAAAGGACAACCTCGTCTTCCAAAATTCGCCGTTCCCAAACGGTATGACATTAGGCTCAAGCCCGACCTCATCTCGCACCGTTTTGCTGGATCGGTCGCCATCAATCTCGACATCGTTGCCGCCACCACTTTCATCGTTCTTAATGCTGCCGAACTCTCCGTCACCGCCGACTCCGTTTCATTCACCATTGGAGATTCCTCCACGGTTTTTAAGCCTTCGCGAATTGAGTTGATTGAAATTGATGAGATTCTGGTTCTGGAGTTCCCACAGGAAATACCAGTTGGGCAGGGTCTATTGACTATTGAGTTTGAAGGAATCTTGAACGATAGAATGAAAGGGTTCTACAGAAGTACCTATGAATATAATGGTGAGAAGAAGACTATGGCAGTTACACAGTTTGAACCAGCTGATGCCAGGCGGTGCTTTCCTTGTTGGGATGAACCTGCTTGCAAGGCTACTTTCAAGATCGCATTGGATGTGCCTTCAGAGCTTGTTGCTCTTTCCAACATGCCAGTTGCTGAAGAAATAACAAATGGAAATCTAAAAACAGTTTCATATGAAGAATCACCAATCATGTCTACATACTTGGTTGCTGTTGTCGTTGGTTTGTTTGATTATGTGGAAGATCACACCCTTGACGGCGTCAAAGTCCGAGTGTACGGTCAAGTTGGTAAGGCAAACCAGGGGAAATTTGCGCTTGATGTGGCTGTGAAAACTTTGGAACTTTACAAAGAATACTTCGCTACTCCTTACTCTCTGCCAAAATTGGATATGATTGCGATCCCTGATTTTGCTGCTGGGGCCATGGAGAATTATGGTCTGGTTACATATCGGGAGACTGCTTTGCTATATGATGAGCAGCATTCTGCGGCTGCAAACAAACAGAGGGTGAGCTATTTAGCAACCGATAGCTTGTTTCCTGAGTGGAAAATATGGTCTCAATTTCTTCATGAATCCACTGAGGGTCTTAGGTTGGATGGACTTGCAGAATCGCACCCAATTGAGGTGGATATAAATCATGCTTGTGAGATTGATGAAATATTTGATGCAATAAGTTATAGAAAAGGTGCATCTGTTATTAGGATGCTACAAAGCTATCTCGGTGCTGAATGCTTTCAGAGGTCGCTGGCTTCATATATAAAAAAATATGCTTGCTCAAATGCTAAGACTGAGGATCTCTGGGCTGCACTTGAGGAAGGATCTGGTGAACCTGTGAACAAGTTAATGAACTCATGGACAAAGCAGAAGGGATATCCTGTTGTATCTGTTAAAGTTAATGAGCAGAAATTGGAATTTGATCAGTCACAATTCTTGTCAAGCGGTGCTCAAGGAGAAGGCCAATGGATTGTTCCAGTAACATTATGCTCTGGCACTTATGAGGTCCGCAAGAGTTTCCTCTTGCAAACAAAATCTGATGCACATGACGTCAAAGACTTCATTGGTACCACAGACATAAGTGGAAATTATTGGATTAAACTTAATGTGGATCAGGCTGGTTTTTACAGGGTGAAATACGATGAGGTGCTTGCTGCTAAACTTAGATATGCAGTAGAGAAGCAACTCTTATCTGCCTCAGACCGATTTGGCGTTTTGGATGATGCATTTGCACTTTGTATGGCTCGCCGAGAATCATTAACGTCCTTGATTAACTTGATGGGATCATACAGAGAGGAAGTTGATTATACCGTGCTGTCGAACCTAATAACTATAACTCTTAAAGTTGAACGCATTGCAGCCGATGCTGTACCTCAATTGCTAGATTATTTCAGGCAGTTCTTTATTGGTCTTCTCCAGCACTGTGCTGAGAGGCTTGGTTGGGAGCCTAAACCAGGAGAAAGTCATCTAGATGCAATGTTGAGAGGAGAAATATTGACTGCTCTTGCTGTGCTTGGTCATGATTTAACATTGGAAGAAGGAAGCAAGCGTTTTCAGGCATTCTTAGAGGACAGGAATACACCACTTCTCCCGCCTGATACAAGAAAGGCAGCATATGTAGCTGTAATGCAAGGGGCAAGCAAATCTAATCCATCCGGTTATGAATCCCTTTTGAAAGTATATAGAGAAACTGACCTAAGCCAGGAGAAAACACGAATTCTTGGCTCTCTGTCATCTTCACGTGATCCAAGTCTAATTCTTGAAGCTCTCAACTTTATGTTGTCATCTGAGGTTCGAAGCCAGGATGCCGTTTTTGGACTTGCTGTTAATAGAGAAGGACGAGATGTAGCTTGGGCATGGCTTAAGGAAAATTGGGAACACCTCGTAAAAACATATGGTACAGGATTTCTGATAACTCGCTTTGTCAGTGCAGTTGTCTCACCGTTTGCATCCTTTGAGAAGGTAAAGGAGGTAGAAGAATTCTTTGCTAGCCATGCTATGCCTTCCATTGCTAGAACTTTAAGGCAGAGCCTTGAGCGGGTTAATATCAATGCAAACTGGGTTGAGAGTATTCGGAAGGAAGACAGCCTTAGTGATGCTGTGAGGGAACTGGCATACAGAAAATATTAG 2517 0.4315 MDQFKGQPRLPKFAVPKRYDIRLKPDLISHRFAGSVAINLDIVAATTFIVLNAAELSVTADSVSFTIGDSSTVFKPSRIELIEIDEILVLEFPQEIPVGQGLLTIEFEGILNDRMKGFYRSTYEYNGEKKTMAVTQFEPADARRCFPCWDEPACKATFKIALDVPSELVALSNMPVAEEITNGNLKTVSYEESPIMSTYLVAVVVGLFDYVEDHTLDGVKVRVYGQVGKANQGKFALDVAVKTLELYKEYFATPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDEQHSAAANKQRVSYLATDSLFPEWKIWSQFLHESTEGLRLDGLAESHPIEVDINHACEIDEIFDAISYRKGASVIRMLQSYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVVSVKVNEQKLEFDQSQFLSSGAQGEGQWIVPVTLCSGTYEVRKSFLLQTKSDAHDVKDFIGTTDISGNYWIKLNVDQAGFYRVKYDEVLAAKLRYAVEKQLLSASDRFGVLDDAFALCMARRESLTSLINLMGSYREEVDYTVLSNLITITLKVERIAADAVPQLLDYFRQFFIGLLQHCAERLGWEPKPGESHLDAMLRGEILTALAVLGHDLTLEEGSKRFQAFLEDRNTPLLPPDTRKAAYVAVMQGASKSNPSGYESLLKVYRETDLSQEKTRILGSLSSSRDPSLILEALNFMLSSEVRSQDAVFGLAVNREGRDVAWAWLKENWEHLVKTYGTGFLITRFVSAVVSPFASFEKVKEVEEFFASHAMPSIARTLRQSLERVNINANWVESIRKEDSLSDAVRELAYRKY 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03127 838 Gene3D - 512 824 - -
Vimu10g03127 838 Pfam ERAP1-like C-terminal domain 494 811 IPR024571 -
Vimu10g03127 838 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 9 206 IPR042097 -
Vimu10g03127 838 Pfam Peptidase family M1 domain 302 416 IPR014782 GO:0008237|GO:0008270
Vimu10g03127 838 FunFam Aminopeptidase 422 509 - -
Vimu10g03127 838 Gene3D tricorn interacting facor f3 domain 3 207 IPR042097 -
Vimu10g03127 838 Gene3D Neutral Protease Domain 2 301 421 IPR027268 -
Vimu10g03127 838 Gene3D - 422 509 - -
Vimu10g03127 838 FunFam Aminopeptidase 512 829 - -
Vimu10g03127 838 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 215 427 - -
Vimu10g03127 838 PRINTS Membrane alanyl dipeptidase (M1) family signature 190 205 IPR001930 GO:0006508
Vimu10g03127 838 PRINTS Membrane alanyl dipeptidase (M1) family signature 268 278 IPR001930 GO:0006508
Vimu10g03127 838 PRINTS Membrane alanyl dipeptidase (M1) family signature 143 158 IPR001930 GO:0006508
Vimu10g03127 838 CDD M1_APN-Q_like 18 418 IPR034016 -
Vimu10g03127 838 FunFam Aminopeptidase 1 208 - -
Vimu10g03127 838 Gene3D - 208 289 - -
Vimu10g03127 838 PANTHER PROTEASE M1 ZINC METALLOPROTEASE 301 819 - -
Vimu10g03127 838 Pfam Peptidase M1 N-terminal domain 15 200 IPR045357 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03127 K08776 - gmx:100811437 1449.11