Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03102 ATGGCTGTGTCCTCTACCACTGCCCCAGTATGTCTTCCTGCTAAAAACATTCCAACCCCTCAGCTCCAAAAGCTTGGTTTCTCAAGTACCATTTCTTTTACTGTGAAACAGCGGAGATCGTTACGCATCAGAAGCTCCTCGGCTGAGACCTCTGACACAGGGCTAGATTCAGAGAGTTCCATTGAACTTCCCAAGGAACCCTATTCATTAATTTCAGCTCTTAACGTCGAAAGGATTCTCCGCGGCTTACCAATTACAGATGCAGATCATTATGGTAGGCTAGGTGTTCCACGAGGATGTCCCTTTGACATGGTGGGGGTTGCCTATAAGAACAAGATTCAAGAATTGAACAGTCAGAATCTAGAGGAAGAGGAACTTGAGAAGAAATTGGAACTTCTCAAAGAATCATACATCATCCTGTCCTCAGAAGAAGAAAGAAGAATCTATGACTGGAGTTTGGCCAGAGTAAACAACACCGAAACATTCATTTGGCCGTTCGAGGTTGACATAACACAGACAAAAATCCCAGATGAAGATCCTCCACAACTGGACACTGAAGATGTTCGACCAACGATATTGGTTGGGTATTTCACTTTGGGATGGATAGTGCTAGCAGTTGTGGCATCTATCGCTATAGCACTAAACCAATAG 651 0.4409 MAVSSTTAPVCLPAKNIPTPQLQKLGFSSTISFTVKQRRSLRIRSSSAETSDTGLDSESSIELPKEPYSLISALNVERILRGLPITDADHYGRLGVPRGCPFDMVGVAYKNKIQELNSQNLEEEELEKKLELLKESYIILSSEEERRIYDWSLARVNNTETFIWPFEVDITQTKIPDEDPPQLDTEDVRPTILVGYFTLGWIVLAVVASIAIALNQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03102 216 Coils Coil 109 143 - -
Vimu10g03102 216 SUPERFAMILY Chaperone J-domain 88 155 IPR036869 -
Vimu10g03102 216 Gene3D DnaJ domain 80 163 IPR036869 -
Vimu10g03102 216 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC 1 212 IPR044199 GO:0009535|GO:0010598
Vimu10g03102 216 FunFam NAD(P)H-quinone oxidoreductase subunit U chloroplastic 71 162 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03102 K23052 - gmx:100793741 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03102 10 41831744 41832761 Vimu10g03102 10 41831744 41832761 ECH