Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03081 ATGAAATCTCCGACGAGGAAGGGAGCAACCAAATTCATCAACATGCCTTCGTCATTCAACTTCGCCTGCATGTACAACAGGTACATCCGACGCTGTTTCACGGGGGCGGGCCTCTGGTCGCAGGCCCTCGCCCTTGACGACAAGACCACCATGCACTTTTGGGGCCCAAGAAACAAAACGGCCCAGAAGCCCTCTCTGGTTCTCATCCACGGCTTTGGGCCCGTGGCCACCTGGCAGTGGCGCAGACAGGTCAAATCCCTGGCCCCACACTTCAACCTTTACGTTCCCGACCTCGTATTCTTCGGAGGCTCCACCACCATTTCCAGCGAGAGGAGCGAGGTGTTTCAGGCGAAGTCGGTGGGGAAGCTTCTGGATAAGTTGGAGGTGGAGACGTTGCACGTGGTGGGCACCAGCTACGGGGGCTTGGTCGCTTACAATCTGGCCAAGATGTTGGGGGAAGGGAGGGTGAAGAAAGTCGTCATCGCCAGCTCCGGCGTTAACATGACCGCCAGTAGTAACCTAGAGATGCTCCGAAGTTCTAAATTGAACAGCATCGACGACCTCATGTTTCCTTCTTCCTCCCACCACCTGCGCCAGTTGATGTCCCTCTCCATCTACAAGCCTCCCCATGTCCCTGATTTTGTCCTCAGTATCTTCATTCATGAATTGTACGGAGAGAATAAGGAGAGAAAATTGGAAATTCTAAATGGGATCTCTGTCGGCAGGGAAGAAACCTCTAACGAAGTTCTGATAGTGTGGGGGGAAGAAGACCGGGTTTTTCCGGTGCGATTGGCGCATGAACTGAAAGAGGTGATAGGTAAAAATGTAAAATTAGAACTGATAAAGGAAGCAGCTCATGTGCCTCAAATTGAAAAGCCAGTAGAATTCAACCGCATCATCATTAATTTTTTACGGGGTACTCCTTGA 927 0.5156 MKSPTRKGATKFINMPSSFNFACMYNRYIRRCFTGAGLWSQALALDDKTTMHFWGPRNKTAQKPSLVLIHGFGPVATWQWRRQVKSLAPHFNLYVPDLVFFGGSTTISSERSEVFQAKSVGKLLDKLEVETLHVVGTSYGGLVAYNLAKMLGEGRVKKVVIASSGVNMTASSNLEMLRSSKLNSIDDLMFPSSSHHLRQLMSLSIYKPPHVPDFVLSIFIHELYGENKERKLEILNGISVGREETSNEVLIVWGEEDRVFPVRLAHELKEVIGKNVKLELIKEAAHVPQIEKPVEFNRIIINFLRGTP 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03081 308 PRINTS Alpha/beta hydrolase fold signature 134 147 IPR000073 -
Vimu10g03081 308 PRINTS Alpha/beta hydrolase fold signature 249 263 IPR000073 -
Vimu10g03081 308 PRINTS Alpha/beta hydrolase fold signature 90 105 IPR000073 -
Vimu10g03081 308 Pfam alpha/beta hydrolase fold 64 179 IPR000073 -
Vimu10g03081 308 SUPERFAMILY alpha/beta-Hydrolases 62 305 IPR029058 -
Vimu10g03081 308 Gene3D alpha/beta hydrolase 34 307 IPR029058 -
Vimu10g03081 308 PANTHER SI:DKEY-122A22.2 19 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03081 Vimu-Chr10 41668078 41669309 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03081 243 304 Acyl Lipid Metabolism Gene Families AT3G10840 43.548 6.44e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03081 - - gmx:100812592 436.032