Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03075 ATGAACTTATCCAAGAAAGGATCCCAAACGGATGCAAAGCTATTAAGCCCAAACAAGGCAACAACTCTGAATCCAAATGCAGCAGAGTTTATTCCTTTTGCCCTCAGATCATCATCATTACCTGGAACTACCAGCTCGGTAGATGCAACAGCAGGGCTTTCGGCTGCTGGAGCTCTTGGGAAAGCAGTTTTAGATAGATCAGAATCATCCATTTCAAATAATTCTGATGATGAGGTGCATCAATACTGGCGATGTCAGCTCCCTGATGATATTACCCCTGATTTCAAGGTCATGGGAGAAGATGAATCTCAAGGTCTAGATGATCTTCCTTTAGCAGGTTTATCCGTACATGAGGACAATGAAGCCTCCAGGTTTCCTTCTTCCAAAGGAAGTAAATATATAATAAATGAGCAGGAGGAAATATCTCAACTGCATAATAATGGCAATAGCTTTGTGGATAAAATAGGGTTTTCCCATTCAAGCTACAGGGAGGACCCATCTTCTACAAGCTTTTTGAATGCTCTGGCAAAGCCTTGGGAGGGCCCAATTGGGAGCGCTGACCAGCTTGTTAGCAGTGGTCAAGAGGGGCTTGCTTATGATGACAACAGTGGACATGGATACTTAAATGATGTTTTGGCTGAAAATGCAATTATGGATGATACTGATATGAATCCTTTGGACTATTTAGCTTCCATGTTCCCTGGTTTTGCAGCAGAAAGCCTCGCAGAAGCTTACTTTGCCAATGGATGTGATTTACATCTGACCACTGAGATGCTCAGTCAATTAGAGGTCCAACCTACCTCTAGCTTCGAATTTCTAATTGCAGTTGCCTGGTACTGGGGGAGGCAGCTTCAAGTTGATGGTGGTTTCAATCAAACTTTGAATTCAAAGACTCTGTCAGCTCCCAATCTGAGTGCAATGGACTTTCCTGCACTTACTTCACCAGATGGCCAGGCTGCTTCAGTTAAATACGTGGTTGATAATGTCCAGCAAAGTCGAAATCCTTACCAGTCATTTGACAGTGATGTGATGCTTTTCAAATCTAGCTCTTCAGTTCCATCTAGAGGTGCTGTTGACTTTGCTTCAGCTGTTAGAAAGTTGGCTTCTCAGGATTCTGGTGGTATTTGGAAGTATGACAAGAATGGCTCTGGTGATGCTGCTATAGGTTCAAGTAGGAATACAAATGTTTTGGGTAGTGGCTACAATGGTGGACAGGCCAGAGCACACTTTGGTGATCGATTGCAGAACCGTGGCTCAGCTCGAGCAGCTCCTATTTGGCTTGAAACCGGTGATGCCGTTGCAAATATGTATTCAGAGCTGCGGGAAGAGGCTCGTGATCATGCATGCTTACGTAATGCATATTTTGAGCAGGCTCGTCAAGCTTACCTTATTGGTAATAAAGCCCTGGCAAAGGAACTAAGTGCTAAAGGGCAGCTTCACAACATGCATATGAAGGCAGCTCATGGAAAAGCTCAAGAATCCATTTACCGTCAGAGTGATTACACAAGTGTTGATTTTTTCAGAAATGCAGTTGCTTCAGAGATGCAGGGCAATGGAAGAGGACACGAGAGGATAATAGACCTACATGGGTTGCATGCGGGTGAAGCCATTCATGTGCTGAAACATGAGTTGAGTGTGCTGAAAAGCACTGCCATAGCTGCTGAGCAGCGTTTGCAGGTGTATATTTGTGTGGGCACAGGTCATCATACCAGGGGTTCCCGCACTCCCGCAAGACTTCCAATAGCTGTACAGCGTTTTCTTCTTGAAGAGGGCATTGACTTCACGGAACCTCAGCCAGGCCTACTTCGCGTTGTGATATATTGA 1824 0.4468 MNLSKKGSQTDAKLLSPNKATTLNPNAAEFIPFALRSSSLPGTTSSVDATAGLSAAGALGKAVLDRSESSISNNSDDEVHQYWRCQLPDDITPDFKVMGEDESQGLDDLPLAGLSVHEDNEASRFPSSKGSKYIINEQEEISQLHNNGNSFVDKIGFSHSSYREDPSSTSFLNALAKPWEGPIGSADQLVSSGQEGLAYDDNSGHGYLNDVLAENAIMDDTDMNPLDYLASMFPGFAAESLAEAYFANGCDLHLTTEMLSQLEVQPTSSFEFLIAVAWYWGRQLQVDGGFNQTLNSKTLSAPNLSAMDFPALTSPDGQAASVKYVVDNVQQSRNPYQSFDSDVMLFKSSSSVPSRGAVDFASAVRKLASQDSGGIWKYDKNGSGDAAIGSSRNTNVLGSGYNGGQARAHFGDRLQNRGSARAAPIWLETGDAVANMYSELREEARDHACLRNAYFEQARQAYLIGNKALAKELSAKGQLHNMHMKAAHGKAQESIYRQSDYTSVDFFRNAVASEMQGNGRGHERIIDLHGLHAGEAIHVLKHELSVLKSTAIAAEQRLQVYICVGTGHHTRGSRTPARLPIAVQRFLLEEGIDFTEPQPGLLRVVIY 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03075 607 MobiDBLite consensus disorder prediction 1 21 - -
Vimu10g03075 607 Pfam Domain of unknown function (DUF1771) 437 498 IPR013899 -
Vimu10g03075 607 CDD CUE_CID7_like 224 265 IPR041806 -
Vimu10g03075 607 SUPERFAMILY SMR domain-like 524 605 IPR036063 -
Vimu10g03075 607 SMART DUF1771_2 436 501 IPR013899 -
Vimu10g03075 607 Gene3D - 484 606 IPR036063 -
Vimu10g03075 607 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 283 607 - -
Vimu10g03075 607 ProSiteProfiles Smr domain profile. 526 607 IPR002625 -
Vimu10g03075 607 SMART SMR_2 523 607 IPR002625 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03075 Vimu-Chr10 41639359 41643375 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03075 - - gmx:100806301 989.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03075 10 41639359 41643375 Vimu10g03075 10 41639359 41643375 ECH