Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03063 ATGGAATTAGATAAACTCAGTAAGCTCGAACAACCTCCTCTCCCTAGCGCATACATCCGTAGCCTAGTGAAACAACTAACCACCTCAGGAACAAAAGGCTCCATGAATGCAAAAGGCCAAAATTTTGTGGTGAACGGTGGGGTTTCCCATGGTCATAATTCAAAACATGGGAAAGTTGCAGATGCTCGTCGAGCACAGCAGTCCATGCAACCTCAACAACATAAAAAACAAGTTAGGAGGAGACTCCACACCAGTAGGCCTTATCAAGAAAGGCTTTTGAACATGGCAGAGGCTCGGAGGGAGATTGTCACTGCCTTGAAATTTCACAGGGCAGCTATGAAAGAAGCAAGTGAACAGAAGCAGCAACACCAACAGACCCAAGAACAGCAGAGAAGGCCATCAGTATCCCTCCAGCCATCCCAGTGTCTAACTTTTGACCGAGATGGAAAATTTAAGTCCAGGCGAAATCCAAGAATTTATCCTGCATGCACATCCAATTTTTCAGGCTACACGGATGATTTATCCTATTCATGCTTATCCCAACCTCCTCCTTCGGTTCCAAATTCTTACACCTGGCCTGCTGCTTCCCCAATCACTCCACCGCACCTTATGACTGAAAACCCCAATTTCGTACTTCCAAATCAGACTTTAGGATTGAATCTCAACTTTCAAGATTTCAACAACTTAGATGCTACCTTTCTCTTCAATAACTCGTCATCATCGTCTAACTCATCTGCAACCTCGACTTCTCCAGAGGAACTTCCTTCCCTTGGAATATCACAGGGAGAGGGGTTATATTCAATGGGGGATACGGTTGAATCCAATGCTGCAACACAGGTAAATGGAGGCTTACACACAGCCGTGGACGACGAGGGTATGGCAGAGATCAGATCGTTGGGAGAGCAATATCAAATGGAATGGAATGACACCATGAATTTGGTCAAATCAGCTTGTTGGTTCAAGTTCTTGAAAAACATAGAACATAGAGCACCTGAAGACAAGAACGAATACGACACAAACCATAATTTTGACCAACTTTTGGAGTTTCCAGCTTGGTTGAATGCAAACGAGAGCTGCTTAGAGCAGTGCTCGGTGGATTATTTTCAGGATTCTTCCTTGCCTCGTAATTATCCTGGTCGGTTTTGTGCTGAACTTGCTAAACTTGGTGATGGAGCACAAGTCAAGACCCTATGTACCTTCAAACGGTATAGAATTGTACCCCTTAAAGGCAATCTTCTCTGTATCTTAGTGTACGATTTTCTCGGTCATGCAGACGCTATGAGGTTTATGGCCATGTACAACAGTCAATTTGTAAGGCATCATGGTCCAGTCGATTCTTGA 1341 0.4422 MELDKLSKLEQPPLPSAYIRSLVKQLTTSGTKGSMNAKGQNFVVNGGVSHGHNSKHGKVADARRAQQSMQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRAAMKEASEQKQQHQQTQEQQRRPSVSLQPSQCLTFDRDGKFKSRRNPRIYPACTSNFSGYTDDLSYSCLSQPPPSVPNSYTWPAASPITPPHLMTENPNFVLPNQTLGLNLNFQDFNNLDATFLFNNSSSSSNSSATSTSPEELPSLGISQGEGLYSMGDTVESNAATQVNGGLHTAVDDEGMAEIRSLGEQYQMEWNDTMNLVKSACWFKFLKNIEHRAPEDKNEYDTNHNFDQLLEFPAWLNANESCLEQCSVDYFQDSSLPRNYPGRFCAELAKLGDGAQVKTLCTFKRYRIVPLKGNLLCILVYDFLGHADAMRFMAMYNSQFVRHHGPVDS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03063 446 Coils Coil 106 129 - -
Vimu10g03063 446 MobiDBLite consensus disorder prediction 113 156 - -
Vimu10g03063 446 MobiDBLite consensus disorder prediction 118 143 - -
Vimu10g03063 446 MobiDBLite consensus disorder prediction 240 256 - -
Vimu10g03063 446 PANTHER E1A-BINDING PROTEIN P400-LIKE 8 375 - -
Vimu10g03063 446 MobiDBLite consensus disorder prediction 65 84 - -
Vimu10g03063 446 MobiDBLite consensus disorder prediction 240 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03063 Vimu-Chr10 41527336 41529227 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03063 - - var:108331980 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03063 10 41527336 41529227 Vimu10g03063 10 41527336 41529227 ECH