Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03046 ATGAGTGGCCAAAACCAAAGCTGTTTAAGCAATGGAACCGAACGATCAAGGATGCATTGGACTCCATTGATGGAACGCTACTTCATTGATCTCATGTTGGAGCATTTGCAGATAGGGAACAGGGTTGGCCACACTTTTAACAAACAAGCTTGGACAGACATGCTCACCTCGTTCAATGCTAACTTTGGTTCACAGTTCGATAAAGATGTCCTGAAAACTCGGTATACCAATTTGTGGAAGCAGTTCAATGATGTCAAGAGTCTTCTTTCTCAATTCGGTTTTTCGTGGGATGCTGCCCGGCAAATGGTTGTGGCTGTTGATGATTCTGTTTGGGATGCTTATTTGAAATCTCACCCTGATACTAGATGCTACAGGACAACACCAGTGTTGAACTTTGATGATTTGTGTGTCATATATGGCAACGCTGTTGCTGACGGAAGATATAGTTTATCTAGCCATGATGTACGCCTTGATGATAAATTGCAAGGACTGCATTTGGTTGATGGGACAGGAACCGTTGCTGTACCAAGTTCTGATCGTACCAGGACGGATTGGACTGCTTCTATGGACCAGTTTTTTATAGAGCTTATGGTTGATCAGTTGAGTAGGGGCAATCGAGTGGACAATGGATTCAATAAAAAGGCTTGGACAGATATGCTAGCCATTTTCAATACTAAGTTTGGATGTCAGCATGGTAGAAGGGTTTTAAAGAATCGGTTCAAGAAACTGTTGAAATACTACCGTGATATAACAAATCTTGTAAAACAAGGCTTTTCGTGGAATGAACAACATCAAATGCTTTTGGCTGATGATGATATCTGGGATTCTTATGTCAAGGCACATCCGCATGCACGAATATATAGATCGAAAACTTTGCCAAACTATCGTGATTTAGAATTAATATTCAGAAACGTGTCTGAAAATGAGATCAGTAATTTGCAACCGGAGAAAAATCACGAAGATGTCATATCAGAAGAAACAAAGGACGGCCTTAAGATCTCTGGAGAACTTAGTAATTACCTCTCTGATCATTTCCCTGAAGGTGAAGTAAAAGGAAGTCGCAACCCGAGTGGCACTGACCGAACCAGAACATATTGGACACCCCCAATGGACAGATGCCTCATTAACTTGTTATTGGACCAAGTCAAACATGGAAATAGACTTGGGCAGACATTCATTTCCCAGGCCTGGAATGACATGATTACATCTTTCAATGAACAATTCAATTCTCAATATGACAAAGATGTTCTGAAGAATCGTTACAAACATTTGAGGAAACAGTTCAATGATGTAGACCATATTCTTCAGCATGATGGGTTCTCATGGGATGATACAAGAGAAATGATTGATGCACAGGATCATGTTTGGGATTCATATACTAAGGCACACCCTGAAGCTCGATCACTTAGAGTTAAAACCTTGCCTGACTATGGGAAATTGTGTATAATATTTGGAGCGAAAGGTGAACAGAAGAACGGCGTTTTCTCAAATTATGATACTGGTTCTACAATAGAGTGGACAGGATCAATGGAACGCCGTTTTGTTGACGTTATGATTGAGCAAGTAAATAATGGAAATGGGATTGAAAATCTATTCAATGAGGAAGCTTGGATGCATTTGGCCCAAACATTCAACGGTGGATGGGGACTCCAATCTGCTAAGAAGGTTCTAATGGATCAATATTTATGCTTGATGAAGAAACACGATGACATCTGCAACATTCTCAGTCACATTTTCTCAATTTATGTTATTTCTTTTGGTACTCTTCCCCACTTCCAAGTATCCCATTTTCTTGATTGTGTTAGCTTGCGTAGAGGTCTATTGGATCACCCAGATGCTATCTCATATAAAAACAAGTGTTTGTATCTTTTCCATGATTTATGCAAGATTTTCGGAAACAAAGTAATGGAAATATCAAATGTCAAAGCGAGTAATCTGGAGCAGCTTCACTTGATGGAAGAAGATGATTTTACCATTGAGATGGGTTTGGATGAAACATCTGAAGATTTGGTTGATATCATCAATGTTGACATATCAGAGCAAGATCTGGGAAAGGGAAGGGAAAATGATGGTGAGGAATCATTTGGGAATTTGGTGGTGAGTGGCAGCAATGAAATTGACATTGATGCCGTTGAAATAAATGGAAATTTAGATGTGGCTAGTAACAATGAAATATGGAACCAAGACAGAGAAAAAGCAATGACACACCATGTGAGGAAAAGGCCTGGTACGATGATGTCTAGAGACTCAACACTTCCCAAAAAGAAGCTGCAAATGAAAGAAGCTTTGTCTGAGATGGCTAGTGCTGTGAAGGCACTGATGAATAAGAGAGAGAACAGCAATTCATCATTTGAAGATGCTTTGAGTGTTCTTCAGGCTATGCCTGACATAGATGAGGAGTTAGTAATGGATGCTTCTGATCTGTTGGAAGATGAGACGAAGGCAAAGATATTTTTAGCTTTGGACATCTCTTTGAGAAAGAAGTGGTTGCTTAGAAAGCTTCGACAGTAA 2511 0.3978 MSGQNQSCLSNGTERSRMHWTPLMERYFIDLMLEHLQIGNRVGHTFNKQAWTDMLTSFNANFGSQFDKDVLKTRYTNLWKQFNDVKSLLSQFGFSWDAARQMVVAVDDSVWDAYLKSHPDTRCYRTTPVLNFDDLCVIYGNAVADGRYSLSSHDVRLDDKLQGLHLVDGTGTVAVPSSDRTRTDWTASMDQFFIELMVDQLSRGNRVDNGFNKKAWTDMLAIFNTKFGCQHGRRVLKNRFKKLLKYYRDITNLVKQGFSWNEQHQMLLADDDIWDSYVKAHPHARIYRSKTLPNYRDLELIFRNVSENEISNLQPEKNHEDVISEETKDGLKISGELSNYLSDHFPEGEVKGSRNPSGTDRTRTYWTPPMDRCLINLLLDQVKHGNRLGQTFISQAWNDMITSFNEQFNSQYDKDVLKNRYKHLRKQFNDVDHILQHDGFSWDDTREMIDAQDHVWDSYTKAHPEARSLRVKTLPDYGKLCIIFGAKGEQKNGVFSNYDTGSTIEWTGSMERRFVDVMIEQVNNGNGIENLFNEEAWMHLAQTFNGGWGLQSAKKVLMDQYLCLMKKHDDICNILSHIFSIYVISFGTLPHFQVSHFLDCVSLRRGLLDHPDAISYKNKCLYLFHDLCKIFGNKVMEISNVKASNLEQLHLMEEDDFTIEMGLDETSEDLVDIINVDISEQDLGKGRENDGEESFGNLVVSGSNEIDIDAVEINGNLDVASNNEIWNQDREKAMTHHVRKRPGTMMSRDSTLPKKKLQMKEALSEMASAVKALMNKRENSNSSFEDALSVLQAMPDIDEELVMDASDLLEDETKAKIFLALDISLRKKWLLRKLRQ 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03046 836 Coils Coil 759 779 - -
Vimu10g03046 836 PANTHER EXPRESSED PROTEIN 10 163 - -
Vimu10g03046 836 Pfam Myb/SANT-like DNA-binding domain 365 459 IPR024752 -
Vimu10g03046 836 Pfam Myb/SANT-like DNA-binding domain 505 576 IPR024752 -
Vimu10g03046 836 Pfam Myb/SANT-like DNA-binding domain 185 277 IPR024752 -
Vimu10g03046 836 Pfam Myb/SANT-like DNA-binding domain 19 114 IPR024752 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03046 Vimu-Chr10 41361090 41366057 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03046 - - vun:114196091 1457.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03046 10 41361090 41366057 Vimu10g03046 10 41361090 41366057 ECH