Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03039 ATGGCTTCTTCTGCTAATATTTTTCAAAAGCGTAAAAAGGAAACGATGGATGTGAATCAACCAGGATCAAGATCCAGGGTCCTTGTTTGTGCATCAGCATCATCTTCTTCTCGCTGTAAAGCATGGTTAGTGCAATCCATTCCCACCAATATGCCCCACCTACACCATATTCCTGGCACCCTCTCTACTGGGGATGTGCTTCGGTGGCTGGCTGCAAACTCCACCACGAGGCTTCACATAATTGCCCAATACTGGCAGCTTCTACCTTCCCCCAACGATCCTCGATCTGGGGACTATGGTTACACTCAACATCAGATGCATGAATTTGGTGCCAGTGAAGGTGTTTCTCTTTATCAAGAATTAGATGCTGCTGCTGACCGGAATGTTAGCATCAGGTTACTGTCCCACTCTGGAGTATATCCAACTTTTACCTCAGAACCATCCAAACTTGCTTTCGGAAGGCCAAATGTCGAAAATGTGACATTGCTGCTGGAGGATTGGTGGGGCTCCGGGATTGTTCATGCCAAAGTTTGGATATCTGATAGTAGGGATGTGTATATTGGATCTGCAAACAATGACTGGAAATCTCTCACCCAGGTCAAGGAACTGGGAATTTACTTTACTGATTGTCCTGAAATAGCTGAAAAGGTTGAGCTGTACTTTGACAATTTGTGGACACTGGCATCTCTCAATTCTTCAGCTTACACGAAAACAGTGTTTGATCAAGAGTGGCAAGTGGAGAGGAAGTTTCCTTGCTGGTCACATTTCATTGATCATAAAGAGAGGTGCAAGTCACCTCTTCTTCAATATCTGAAGACTCCTCATGTTGCAGGATATCCTATTCTGTCTGACCCTTACATGTTTGTGGTTTCATTTCAAACCCCTGGGACTAACTATTCAACAAAGCTCCCCCAAGCCAGCTATCTATCCTTTGCACCCCCAGAGCTATTATTTGGCAAATATCAAGCTGATGAGCAGGCATGGATTGATACAATCAAGTCTGTTGGAGATAAGCAGGCAGTTAGAATCAGTACAATGGACTGGTTAGGTCAGTCACAATATATGGACCAAACAATTTACTGGTCATCCTTATCCTCTGCAATATCAGAGGTGGTGTTTTCGAAGAATGCAACAGTACAGCTACTGGTGGCATATTGGGCACACTCCATCAGTAACACAGATGTGTACCTCAAGTCTCTTCTCTACACCAACAACCTCTGTTCTTCCTCAAAGTACAACAAATGCTCTGGGAAAGTTGAGATAAAATATTATGTGGTTCCTGATTTCAACATGACAGGACCTGCTATTCATGGAGGAACTAAAACAGGAAACAAGTACCCTGATTTTACAAGAGTGAATCATGGAAAATATGCAGTTAGTGATGTAAGGGCACACATTGGGACTAGCAACCTTGTATGGGACTACTTCTACACAACAGCAGGTGTCAGCTTTGGGACATACAACACTGCCATCATCTCTACACTTAGTGAAATTTTCAATGCTGATTGGAACTCACCCTATGCTGTTCCATTAGAAGAGCTGGAGAAAGGTCACAAAAGTTCAATTTAA 1569 0.4328 MASSANIFQKRKKETMDVNQPGSRSRVLVCASASSSSRCKAWLVQSIPTNMPHLHHIPGTLSTGDVLRWLAANSTTRLHIIAQYWQLLPSPNDPRSGDYGYTQHQMHEFGASEGVSLYQELDAAADRNVSIRLLSHSGVYPTFTSEPSKLAFGRPNVENVTLLLEDWWGSGIVHAKVWISDSRDVYIGSANNDWKSLTQVKELGIYFTDCPEIAEKVELYFDNLWTLASLNSSAYTKTVFDQEWQVERKFPCWSHFIDHKERCKSPLLQYLKTPHVAGYPILSDPYMFVVSFQTPGTNYSTKLPQASYLSFAPPELLFGKYQADEQAWIDTIKSVGDKQAVRISTMDWLGQSQYMDQTIYWSSLSSAISEVVFSKNATVQLLVAYWAHSISNTDVYLKSLLYTNNLCSSSKYNKCSGKVEIKYYVVPDFNMTGPAIHGGTKTGNKYPDFTRVNHGKYAVSDVRAHIGTSNLVWDYFYTTAGVSFGTYNTAIISTLSEIFNADWNSPYAVPLEELEKGHKSSI 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03039 522 MobiDBLite consensus disorder prediction 1 21 - -
Vimu10g03039 522 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 449 475 IPR001736 GO:0003824
Vimu10g03039 522 SUPERFAMILY Phospholipase D/nuclease 65 227 - -
Vimu10g03039 522 CDD PLDc_vPLD3_4_5_like_2 308 504 - -
Vimu10g03039 522 CDD PLDc_vPLD3_4_5_like_1 43 210 - -
Vimu10g03039 522 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 169 196 IPR001736 GO:0003824
Vimu10g03039 522 PANTHER PHOSPHOLIPASE D - RELATED 31 519 - -
Vimu10g03039 522 Gene3D Endonuclease Chain A 62 229 - -
Vimu10g03039 522 SMART pld_4 169 196 IPR001736 GO:0003824
Vimu10g03039 522 SMART pld_4 449 475 IPR001736 GO:0003824
Vimu10g03039 522 Pfam PLD-like domain 115 225 IPR025202 -
Vimu10g03039 522 Gene3D Endonuclease Chain A 312 506 - -
Vimu10g03039 522 SUPERFAMILY Phospholipase D/nuclease 305 518 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03039 K16860 - gmx:100778897 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03039 10 41319019 41323280 Vimu10g03039 10 41319019 41323280 ECH