Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03022 GGACGTGAATGTGCGCTTCCCCTCTCTTTCGATCTGGATAGTAAATCGGGTCGAACCGTGGCTTCCTCAGGGTCGCAGAACCTCTCTCGAAGAAAGGCTTCTTCTTCGTCACCGTCTCAGCAACAAACTTCCGGGCCGACCCGGATCGTTTACCGGGAGTCGCGGAGCACCTCGGAATCTGATTTCCCGATCTGGGCACAGAACTGGTTCATCGCATTGCTCTTTGTCATGGCTCTCGGGTTCTTTGCCCTCGCTCTCTTCCTCTTCATCACTCTCGACTCCGACGTTGTTCCTTCTTCCGCTGCCTCCGCCTCTGCCTCCGCTGCTTCCTCCGAAGGCGTCGAGGTTCAGATTACATATGGCACGGTGCTGAAGCTTATGCACGAGAAGACCAAATTTCGGTTGCATTCTCATGACGTGCCCTACGGTTCTGGCAGTGGACAACAATCGGTTACTGGTTTCCCTAATGTGGACGATTCCAATAGTTACTGGATTGTTAGACCTCAGCCAGGAACTAATGCTAAACAAGGTGATTCCATTAAAAGTGGTACCATCATTAGATTGCAGCACATGAGGACAAGGAAGTGGCTGCACAGCCATTTGCATGCATCTCCGATATCAGGCAATCTCGAGGTGAGTTGTTTTGGGGGAGAAAATGATTCTGACACTGGGGACTATTGGAGGCTATTAATAGAGGGAAGTGGGAAGACTTGGAAGCAGGATCAGAAGATTCGCCTTCAGCATATTGACACCGGAGGCTATCTACATAGTCACGATAAGAAATACAGCCGCATTGCTGGGGGACAGCAGGAGGTTTGTGGTGTTCGTGAAAAGCGTGCTGACAATGTCTGGTTGGCGGCCGAAGGTGTCTATCTTCCTGTAAGTGAAAGCAAATGA 897 0.5072 GRECALPLSFDLDSKSGRTVASSGSQNLSRRKASSSSPSQQQTSGPTRIVYRESRSTSESDFPIWAQNWFIALLFVMALGFFALALFLFITLDSDVVPSSAASASASAASSEGVEVQITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTNAKQGDSIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGENDSDTGDYWRLLIEGSGKTWKQDQKIRLQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVSESK 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03022 298 SMART mir_2 115 169 IPR016093 -
Vimu10g03022 298 SMART mir_2 177 232 IPR016093 -
Vimu10g03022 298 SMART mir_2 235 289 IPR016093 -
Vimu10g03022 298 MobiDBLite consensus disorder prediction 13 49 - -
Vimu10g03022 298 Pfam MIR domain 136 282 IPR016093 -
Vimu10g03022 298 Gene3D - 101 298 - -
Vimu10g03022 298 ProSiteProfiles MIR domain profile. 115 169 IPR016093 -
Vimu10g03022 298 FunFam Stromal cell-derived factor 2-like protein 100 298 - -
Vimu10g03022 298 PANTHER STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN 77 293 - -
Vimu10g03022 298 ProSiteProfiles MIR domain profile. 235 289 IPR016093 -
Vimu10g03022 298 ProSiteProfiles MIR domain profile. 177 232 IPR016093 -
Vimu10g03022 298 MobiDBLite consensus disorder prediction 15 49 - -
Vimu10g03022 298 SUPERFAMILY MIR domain 116 289 IPR036300 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03022 - - pcin:129303880 447.203