Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03003 ATGGCGTCCAAGAAGAAGCACTCAGAGGGCATCGCGTTGTTGTCCATGTACAACGACGAGGAAGACGATGAAATGGAGGTCGACGACGACGAAGAAGAAGATGCAAGAATAGGTATGGAAGAAGATGCCGCGGCAGATGCGAGATTTGCAGCGGAGGAAGATTCCGCCAATAGAACAGCGGTCCTTGATTCAGGTAAGGAGGCCGCTGATGAGGGGGCTTCAACGCCACAGAATAACAATTTTGTTTCTCCACCGCCGGAGGAACCTAGGATTAGTCGGAAAGGGGCGCTTACGATAGTTGATTATGGGCATGACGAAGTTGCGATGTCACCTGAGCCTGAGGAGGGGGAGATATATGGTAGCGGTCGAGTCATGTTCGGGGACCAGCTTCATGTCACCAATGGGGATTTACTGGAGAGAACGCCATTAGGAGCAGTCCAAGCTTCGACACCTAGCAATCATGCTAACACTCCTCAGTTATCTGAACCATTGAAATCTGATACCTTGAACAATGATGATGTCATCAAATCTGATGATGCAGAATTGGGTAAAAGAGATCAAGATGATCAAAGATATGTAGATCCATTGGATAAATTTCTTCCTCCCCCACCAAAAACTAAATGGTCAGAGGACCTACAAAGAAAAATAAATAAATTCCTGGAGTACAAGAAGGCTGGAAAAAGTTTTAATGCAGAAGTTCGTAACAGGAAGGACTATCGAAACCCTGACTTCTTACTGCATGCAGTGAGGTACCAGGATATTGATCAAATTGGGTCTTGCTTCAGTAAAGATGTATTTGACCCTCATGGCTATGATTCAAGTGACTTCTATGATGAAATAGAAGCTGATATGAGGCGAGAAAGTGAGAGGAAAGAGCAAGAGAAGAAGAAAGCACAGAAAGTTGAATTTATTGCAGGGGGCACGCAGCCAGGAATTGTAGCTAGCGCTCCTAGGATTGCCATGCCTGTTGCAGGTGCTTCTGCTGTGACTGCAAGTGGTTTGCCTTTGGTGCCTCCTACGGCTGATTCTCGAGATGGTAGACAAAATAAAAAATCAAAATGGGATAAGGTGGATGGTGATAGAAAAAATCCTCTGCCCTCTGCGGGACAGGATTCTGTATCTACTATTGGGGCTCATGCAGCACTTTTATCTGCTGCTAATGCTGGTGGTGGATACATGCAATTTGCGCAACAAAAACGGCGGGAGGCAGAGGAGAAAAGATCTAGTGAAAGGAGGTTGGAAAGAAGATCGTGA 1254 0.4585 MASKKKHSEGIALLSMYNDEEDDEMEVDDDEEEDARIGMEEDAAADARFAAEEDSANRTAVLDSGKEAADEGASTPQNNNFVSPPPEEPRISRKGALTIVDYGHDEVAMSPEPEEGEIYGSGRVMFGDQLHVTNGDLLERTPLGAVQASTPSNHANTPQLSEPLKSDTLNNDDVIKSDDAELGKRDQDDQRYVDPLDKFLPPPPKTKWSEDLQRKINKFLEYKKAGKSFNAEVRNRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYDSSDFYDEIEADMRRESERKEQEKKKAQKVEFIAGGTQPGIVASAPRIAMPVAGASAVTASGLPLVPPTADSRDGRQNKKSKWDKVDGDRKNPLPSAGQDSVSTIGAHAALLSAANAGGGYMQFAQQKRREAEEKRSSERRLERRS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03003 417 MobiDBLite consensus disorder prediction 394 417 - -
Vimu10g03003 417 MobiDBLite consensus disorder prediction 142 188 - -
Vimu10g03003 417 MobiDBLite consensus disorder prediction 330 373 - -
Vimu10g03003 417 MobiDBLite consensus disorder prediction 145 168 - -
Vimu10g03003 417 MobiDBLite consensus disorder prediction 16 39 - -
Vimu10g03003 417 PANTHER TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP 1 399 IPR012479 GO:0006355
Vimu10g03003 417 MobiDBLite consensus disorder prediction 169 188 - -
Vimu10g03003 417 Coils Coil 277 301 - -
Vimu10g03003 417 MobiDBLite consensus disorder prediction 344 362 - -
Vimu10g03003 417 MobiDBLite consensus disorder prediction 71 85 - -
Vimu10g03003 417 Pfam HCNGP-like protein 200 293 IPR012479 GO:0006355
Vimu10g03003 417 MobiDBLite consensus disorder prediction 398 417 - -
Vimu10g03003 417 MobiDBLite consensus disorder prediction 1 94 - -
Vimu10g03003 417 Coils Coil 393 416 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03003 K26267 - gmx:100527074 629.787