Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03001 ATGGCAACTCCAAAGCCAGAGGAGATAAGCCACCCACCAATGGACCAACTTCAAGGCTTAGAGTACTGCATAGACTCAAACCCTTCATGGGGTATGGTCACCTTTAGTCTAATCCTTCCTCAACTGCATTTTCAGCTTCATTCAAAGATTCATTACATTTTGGCCTTAGGAACTGCCGTCATGATTCCTTCTTTTCTTGTGCCTTTGATGGGTGGAACTGATAGAAGAAAATTGTTGATCCTGAAAGTGAAATATCTTCGCGGTCTTAGTTTTAATTTGCATTGTCCTATACAGAGAATTGATATTGATATTTCAAACATTGATACAATGATTCAGGATGATAAAGTGAGGGTGGTGCAGACCCTGCTTTTTGTTGAAGGAATTAATACACTTCTGCAGACACTCTTTGGAACCCGGTTGCCAACAGTGATAGGAGGGTCTTATGCATTTATGGTCCCCATTATATCGATAATTCACGATTCCTCATTGACAACGATTGAGGACCCACATTTGGTCGGTCATTGCGTTGAAATTGGAATTCCCATGTTGATTCTGTTTGTAGCCTTCTCTCAGTACTTGAAAAATTTTCATACTAGAGAGCTACCTATACTAGAGCGGTTTGCCCTACTAATATCAACCACAGTGATATGGGCATATGCACATCTATTAACAGCTAGTGGAGCATACAAACACCGTCCTGACTTAACCCAACATAATTGCAGAACAGACAGGGCCAACCTCATTTCTTCTGCTCCATGGATAAAGATCCCATACCCTCTTGAGTGGGGTGCTCCAACATTTGATGCTGGTCATGCTTTTGGGATGATGGCTGCTGTCTTAGTCTCCTTAATTGAGTCAACTGGGGCATACAAAGCTGCATCAAGACTGGCAAGTGCAACACCACCTCCTGCTCATGTTCTAAGCCGTGGTATTGGTTGGCAGGGAATTGGAATATTGCTGAATGGCCTTTTTGGAACACTCACTGGTTCATCAGAGACCATCATCCTTGACAGAGAGAATGTGGGGCTTCTTGGAAGTACTCGTGTTGGGAGTCGAAGGGTCATTCAAATCTCAGCTGGTTTTATGATATTCTTCTCGATGTTAGGAAAATTTGGAGCTTTATTTGCATCAATACCCTTCCCCATTTTTGCTGCAGTGTACTGTGTTCTGTTTGGTCTTGTGGCTTCTGTGGGGCTATCATTCTTGCAATTCACTAACATGAACTCAATGAGGAACCTCTTTATTACTGGTGTAGCCCTTTTCTTAGGGTTTTCTGTTCCTGAGTATTTCCGAGAGTACAGTTCAAAGGCCCTTCATGGTCCTACTCATACAAGGGCTGGATGGTTCGATGATTTCCTTAACACTATATTCTTCTCATCTCCAACTGTTGCATTGATTGTTGCTGTGTTCTTGGACAACACTCTTGACTACAAGGATAGTGCCAAAGATAGGGGAATGCCATGGTGGGCCAAGTTTAGAACTTTTAATGGAGATGGCAGGAATGAAGAGTTTTATACCCTTCCCTTCAACCTTAATCGGTTTTTCCCTCCTCGGTAG 1557 0.4271 MATPKPEEISHPPMDQLQGLEYCIDSNPSWGMVTFSLILPQLHFQLHSKIHYILALGTAVMIPSFLVPLMGGTDRRKLLILKVKYLRGLSFNLHCPIQRIDIDISNIDTMIQDDKVRVVQTLLFVEGINTLLQTLFGTRLPTVIGGSYAFMVPIISIIHDSSLTTIEDPHLVGHCVEIGIPMLILFVAFSQYLKNFHTRELPILERFALLISTTVIWAYAHLLTASGAYKHRPDLTQHNCRTDRANLISSAPWIKIPYPLEWGAPTFDAGHAFGMMAAVLVSLIESTGAYKAASRLASATPPPAHVLSRGIGWQGIGILLNGLFGTLTGSSETIILDRENVGLLGSTRVGSRRVIQISAGFMIFFSMLGKFGALFASIPFPIFAAVYCVLFGLVASVGLSFLQFTNMNSMRNLFITGVALFLGFSVPEYFREYSSKALHGPTHTRAGWFDDFLNTIFFSSPTVALIVAVFLDNTLDYKDSAKDRGMPWWAKFRTFNGDGRNEEFYTLPFNLNRFFPPR 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03001 518 Pfam Permease family 177 430 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vimu10g03001 518 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 171 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03001 Vimu-Chr10 40924522 40927971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03001 5 517 Organic Solute Cotransporters AT2G34190 66.851 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03001 - - gmx:100795365 773.081