Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02990 ATGAAAAGGAGGGAAAAAGGGGCTGAGATGGTGGTCCACACTTGGCTTAAAGTCAAAAGCAGGCATAAGAAGAGTATTGAGAAGTACGTTGGGGAACGAGCCCAATCAATGGGCCTCTCTCTCATTTTGAGTAGTGAAGAACACAAGAACATCATAAGTTCATGTTGGTTCCTCTCACACAATGCTAAGTTACAGGCCACTGCATTTTTGTTTTCTGCTCACAGTTTTCTTGTCCAGTCCCTTTCTGTTGTCGCACCAAGCTTCAGTTTGGTGGGGGACATAGGGCATCACTATGACAATGCAGGACAGTGGCCAGAAAATGAGGGAAAGGATGTTGTAGGCTTTTCTAGGTTGTATGTGTACGACGCTGCACCGTTCGAGAACTCGCCCGTTCCCTTAGCTGCTGAGAGAACACGAAGAAAAGACCCTCTTAATAGCTTCAACAAGTACATATATGGATGGAATATCACTGACAACCATTATTGGGCTTCTGTGGCATATACTGCAGTTCCTATGTTCAGTATTGCAGCAGTTTGGTTCTTGGGGTTTGGCTTGTGCTTATTCACTATTGGTGTTTGTTACTTCTGTCGTAAAAGAGAGCCTTATGGTTTTGTTGGATCTTTATCACACTTTTCTGTGTTAACAGGATCGGATGTGCAGTTCTCTACATCGGCCAAGGAATACGTGGTACATCAAGCTGATTCCACTGTGGATAAGCTTAGGAACGTGTCAGATTATCTTAATCAGGCTAAACAGGTTGGAATCGATCGAATTTTTCTCCCAACAAATGTTCAAACTGACATTGATGCGGCAGAAACAGATATCAATAACTCTGCTGGCACCCTTGCTGACAAGACAAAGGAGAACTCAGACAACATACAAGATCTCTTAGATTCTGCGAGGTTGGCGCTGATCATAATAGCTGCTGTTATGTTAGTCTTGACATTTCTTGGATTTTGTAAGTCTCTTCTGTGCCCCAATTTAGATGCTCAAGATGGGTTCTTGTTACTGGTGCCCTTATATTATGTGGTTTGTTCCTTGTTCTCCATAACAGACAGTTGTGTAGCTGTGAATGAATGGATCCAGTATCCCATTGCACACACGGCAATGGACGATATTCTGCCCTGTGTGGACAATGCTACTGCACAAGAAACAATTTTGCGAAGCAAAGAAGTAACTTCTGAACTAGTGAATTTGGTGAACCAGGTTATCACCAACGCCTCTAACATAAATTTCGCTCCCAATTTCACTCCACTCTATTATAATCAATCTGGTCCCCTCATGCCGCTTCTCTGTAATCCCTTCCATCCCGACATGACTGATAGACAATGTGATCCTGGTGAAGTGACCCTGAGCAATGCAACACAGGTGTATGGCAGTTTCGTGTGCCAGGTTTCACCATCTGAGATATGCATGACGCAGGGGCGTTTGACCCCCACCTTCTACAACCAAGTCTCGGCTGGAATAAATGTGGCCAACGCTTTGTATAATGATGCCCCCTCCCTGGTTGAGCTACAAGATTGCACCTTCGTTCGGGAAACTCTAAGCGTTATATCTACAGACCATTGTCCTGGTCTACGGCGTTACAGTAGATGGATCTATGTTGGATTGGTAATGGTCTCTTTTGCTGTCATGTTCTCTTTGATCTTCTGGATCGTGTATGGAAGAGAGCGTAGACATCGTCTGCATAGAAAAGAGTTAAAGAACTTGACTCCAACACGTGCACCACCACCAGGACAAGCACTAGCATTGGCCCAAATCCCTGAAGGAGACAAGTATAATTAG 1785 0.4426 MKRREKGAEMVVHTWLKVKSRHKKSIEKYVGERAQSMGLSLILSSEEHKNIISSCWFLSHNAKLQATAFLFSAHSFLVQSLSVVAPSFSLVGDIGHHYDNAGQWPENEGKDVVGFSRLYVYDAAPFENSPVPLAAERTRRKDPLNSFNKYIYGWNITDNHYWASVAYTAVPMFSIAAVWFLGFGLCLFTIGVCYFCRKREPYGFVGSLSHFSVLTGSDVQFSTSAKEYVVHQADSTVDKLRNVSDYLNQAKQVGIDRIFLPTNVQTDIDAAETDINNSAGTLADKTKENSDNIQDLLDSARLALIIIAAVMLVLTFLGFCKSLLCPNLDAQDGFLLLVPLYYVVCSLFSITDSCVAVNEWIQYPIAHTAMDDILPCVDNATAQETILRSKEVTSELVNLVNQVITNASNINFAPNFTPLYYNQSGPLMPLLCNPFHPDMTDRQCDPGEVTLSNATQVYGSFVCQVSPSEICMTQGRLTPTFYNQVSAGINVANALYNDAPSLVELQDCTFVRETLSVISTDHCPGLRRYSRWIYVGLVMVSFAVMFSLIFWIVYGRERRHRLHRKELKNLTPTRAPPPGQALALAQIPEGDKYN 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02990 594 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 127 564 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02990 Vimu-Chr10 40822646 40828238 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02990 - - gmx:100816139 764.992