Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02983 ATGGGTTGGAGATACAACGCTGGCTTGTTCCTAATAGCCACTGTCGTTGTTATTTGGGTTACCTCAGCTGAAGTTACCCAGGATATTTTTACAGATTATAAGCAGCCGTTTGCAGTGACATATCTTGGAGCTTCTCTTATGGTAGTTTACCTCCCAATAGCATTCATTAAGGACTGGTTCTGTAACTTACTTAAATCCCGCTCCTCTAAAAGTGGTAAAAATGCAGAGTGCGTGGATGAGTTTTCTGTCAGCATTAGCTCTCCTCTCAAAAGCAATGGAATGCAGAAAAACTTTGAACTAGAACTGGGGAGTGTGATTCGGAAAGATAGTGATTTAGACCTTGCGACACTTTCAGAAGTAAAGCCATTGGTAGCTAAATATAATGATGATACTAATGTGCTAAAGGTGGAGAAAGAACTTACTGCGAAGGAAATTGCTGCTTATGGGTTTTACATTGCACCTATCTGGTTTATAACAGAGTACCTATCAAATGCTGCCCTTGCACGAACAAGTGTTGCAAGTACAACAGTATTATCATCAACTTCAGGACTTTTCACACTTTTCATTGGCGCATTTATGGGTCAAGACTCTTTAAATGTAGCAAAAGTAGTTGCTGTCTTAGTCAGCATGGCTGGGGTTGTCATGACAACAATGGGGAAAACTTGGGCTGCGGATGAATCTCAATTAAGTGATGCCAATGGAAAGCATTCTTTGGTTGGCGATCTTTTTGGAATTCTCTCAGCTATGTCATATGGCCTATTTACAGTTCTTCTTAAGAAATTTTCTGGCGAAGGAGAAAGGGTTGATGTGCAAAAGCTGTTTGGGTATATTGGTTTGTTTACCCTAGTAGCACTGTGGTGGCTTGTCTGGCCATTGATGGCCTTAGGAATTGAACCAAAATTCAGCATTCCCCACTCTGCTAAACTGGACGAAGTGGTTCTTGCAAATGGATTTATTGGAAGCGTACTTTCAGATTACTTCTGGGCACTTTGCGTGGTATGGACTACTCCCCTTGTGGCCACTTTGGGTATGTCACTCACCATTCCTCTGGCAATGGTGGCTGACATGGTAATTCATGGTCGACATTATTCAGCAGTATACATTCTTGGCTCAGCCCAGGTATTTGCAGGCTTTGTAATAGCTAATCTTTCAGACAGGTTGACGAAGAAGTTGGGATTGTAG 1182 0.4188 MGWRYNAGLFLIATVVVIWVTSAEVTQDIFTDYKQPFAVTYLGASLMVVYLPIAFIKDWFCNLLKSRSSKSGKNAECVDEFSVSISSPLKSNGMQKNFELELGSVIRKDSDLDLATLSEVKPLVAKYNDDTNVLKVEKELTAKEIAAYGFYIAPIWFITEYLSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDSLNVAKVVAVLVSMAGVVMTTMGKTWAADESQLSDANGKHSLVGDLFGILSAMSYGLFTVLLKKFSGEGERVDVQKLFGYIGLFTLVALWWLVWPLMALGIEPKFSIPHSAKLDEVVLANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAVYILGSAQVFAGFVIANLSDRLTKKLGL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02983 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 220 - -
Vimu10g02983 393 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 3 390 - -
Vimu10g02983 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 278 387 - -
Vimu10g02983 393 Pfam EamA-like transporter family 139 217 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02983 Vimu-Chr10 40763477 40769385 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02983 K15289 - gmx:100792013 717.227