Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02981 ATGATGATTTGGACTGATAGTTGCCATCAGTCAGCATCTGATCTTCCATTCTTGTCTTTTCCAATTTCTGTTTTTTCTTTTTTCCCTTACTTTCTCCTCTCTTCTACTTCCTTCCACACTCCAAAGCACACACAAATCAAATCAACTGAATTTCGTTCGGTCTCTTCTCTGTCTCTCATGGATGACCCTCCCAAACACCGTCTCCTAACTCTCCTAAACGCTCTCAAAGAAGCTTCCAAAGCCCTTCACACCAACACCAACCCTTTCTCCTTCCTCTTCTCCACAGATTCCAGCGCCGCCATTGACACGCTCCTCGACCTCGAAGTCAAGGCCCACGCCGTCTTCTCCTCCGACCCTAACCTCCGCAACCTCTCTAGTATCCTCTCCTCCCTCCCATCCCTAATCGATAAACTCCACAAACACCGCGGCTACTTCCCACGATCCCTCCTCCAACGCCACCTTACCAAATGCAAGATATCCGACCTCGCCGGCACCATCCAATCCGAAATCCAAAAGTACATCGACCGCGTCGCCGTTCGCGATCTCGTCGACGCGCTGCAGGAGCCGCCGTCGCGGCAAGACGAAGAACAGCGCCAGGTCAAGGCTCTGGTGGAGTTCCGCCAGAGGCTCTCCCAGGGCTTCGATGTGGAGTTCCAGGACCTGGTTCTGCGCGCGAAGGTGTTCACGCTCTTGGAGTGCGTGCTGTTCGAGAAGTCGAATTCGAGTTCGAAGCACGTGAAAGAGGAAGCGGCGATGACCATAGCAGCGCTGGTGAAGTTCAACAAGAATGTGTTCGTCGGGCTGGTGCTTATGGGCCCCACCATCAAGGCCTTGATAGCGATGGCTTCCGCGTGCTCCATTCGCGTTCTATCGTCGCTGATTAATTTCATTCGAAGCCCCCTGGTTGATGAGATTCTGTGCAGCGGTGAGATCTCTAAAATCATAGGGTTTGTGCGTTGGAGGGAATTAGGGCTTCGCGTTGCGGCTTTGGATTGCGTTTTGGAATTGGGATATATAGGGAGAAAGGAAGTGGTGGAAGCGATGGTGAAAGAGGGAGTGATTGAAATTCTAATGGACTTGCAAAGAGAGGGGTGTAGTGAGTGTGAATGTGATTTGGCGTTTGGGAATTGCGTTTCTAGGTTTGCCATTCAAGTAGAAGTGGGCGAAGGGTTAAGCTCCCAAGAGAAGAGAGAGATTAAATCAGAAATACTGAATATTGTGAAGGAAGTTTCGCAGAGTGAAGCAGAGTTTGCGACTGTTAGCGCTGAAATTCTGTGGGGTTCTTCGCCTTAA 1293 0.5073 MMIWTDSCHQSASDLPFLSFPISVFSFFPYFLLSSTSFHTPKHTQIKSTEFRSVSSLSLMDDPPKHRLLTLLNALKEASKALHTNTNPFSFLFSTDSSAAIDTLLDLEVKAHAVFSSDPNLRNLSSILSSLPSLIDKLHKHRGYFPRSLLQRHLTKCKISDLAGTIQSEIQKYIDRVAVRDLVDALQEPPSRQDEEQRQVKALVEFRQRLSQGFDVEFQDLVLRAKVFTLLECVLFEKSNSSSKHVKEEAAMTIAALVKFNKNVFVGLVLMGPTIKALIAMASACSIRVLSSLINFIRSPLVDEILCSGEISKIIGFVRWRELGLRVAALDCVLELGYIGRKEVVEAMVKEGVIEILMDLQREGCSECECDLAFGNCVSRFAIQVEVGEGLSSQEKREIKSEILNIVKEVSQSEAEFATVSAEILWGSSP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02981 430 Gene3D - 116 368 IPR011989 -
Vimu10g02981 430 SUPERFAMILY ARM repeat 178 364 IPR016024 -
Vimu10g02981 430 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 60 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02981 Vimu-Chr10 40754353 40757681 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02981 - - vra:106761341 768.459