Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02968 ATGTCTCTAAAACCGTCCTATTCGGCGGAGAATCTGATGCTTCCGGTATCCGATCCTCCCAACGAAGAAGACAGAGAGAGGCTTTTGAAGAGCGATAGTAAGACCTTCCGAGGACGAAGGATTTACGCTGCCATCTCTTACATGTCATGTGCAGGTTCAGCTCACTCTTATTATTCAGTTTTTGGTTTTTGTTGCCTTGTAGTGCTCTTGATACTGTTCAACAAAGCTGTTCTTTCCTCCTATGATTTCCCGTCTTCGAGTATCGTCACGCTTCTTCAGGAAATTATGAACTGGACTAGAATGTCGGGGGAGGAGAATGGACTCCTTTGTTTGCCAAAGGTTGAAATCAAATGGTTGGAATTGGACTATGATCAGGCTCATGATATATTTGATGTAAGGACCTTTTTCATACTTTTAAACATAATTCTATGCCTTTTACCACTGCAGATGGTATGTTCATGTTGTTTTCTTTATGTATTGAGGCGCTGGAGGATGATTTCTCTCATAGCAGGCGAATCAGTTATTACAGCAGATAACTCGAAGAAGTTTGTGCCACTGAGGACTTTGAAGCACACTCTTCCTCTAACAGGAGCATATTTACTTTACATGTTAGTCACCATGGAGTCTGTTCGTGGAGTAAATGTTCCAATGTACACCACCCTTAGGAGGACCACAGTGGTATTTACGATGCTTGTAGAATATATGCTGATGGGGCATAGGTACACATCTTCTGTCACTTTCAGAATGTATAATTTAGGTAGAGTGGAAAATGTTGTTATCAGTGTTGGCTTGATTGCCTTTGGTGCATTTATTGCGGGAGCACGGGATTTCTCCTTTGATGCCTATGGCTATGCCATTGTTTTCCTGTCTAACATCACCACAGCTATATATCTTGCAATGATAGCCCGTGTTGGAAAAACTAGTGGTCTTAATAGCTTTGGCCTTATGTGGTGCAATGGTATCATATGTGGGCCCTTTTTGGCTATTTGGACTTTAATACGGGGTGACTTGAAGATGACACTCAACTTTCCATACCTTTTTTCACCTGGTTTTATTGTTGTTTTGCTTTTTTCCTGCATACTTGCTTTCTTCCTGAATTACAGTATTTTTCTGAACACAACTCTCAATTCAGCTCTGACTCAGACAATTTGTGGTAATCTGAAGGTTTGTTCACTCGTTAGTGGTGTTGCGATAAATGTTTGTATTGTTCCACATTGGCATTGA 1224 0.4093 MSLKPSYSAENLMLPVSDPPNEEDRERLLKSDSKTFRGRRIYAAISYMSCAGSAHSYYSVFGFCCLVVLLILFNKAVLSSYDFPSSSIVTLLQEIMNWTRMSGEENGLLCLPKVEIKWLELDYDQAHDIFDVRTFFILLNIILCLLPLQMVCSCCFLYVLRRWRMISLIAGESVITADNSKKFVPLRTLKHTLPLTGAYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEYMLMGHRYTSSVTFRMYNLGRVENVVISVGLIAFGAFIAGARDFSFDAYGYAIVFLSNITTAIYLAMIARVGKTSGLNSFGLMWCNGIICGPFLAIWTLIRGDLKMTLNFPYLFSPGFIVVLLFSCILAFFLNYSIFLNTTLNSALTQTICGNLKVCSLVSGVAINVCIVPHWH 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02968 407 PANTHER SOLUTE CARRIER FAMILY 35 63 398 - -
Vimu10g02968 407 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02968 Vimu-Chr10 40651339 40655538 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02968 K15281 - gmx:100778544 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02968 10 40651339 40655538 Vimu10g02968 10 40651339 40655538 ECH
Vimu1g02613 1 37741014 37755771 Vimu10g02968 10 40651339 40655538 PCT