Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02964 ATGTTTGACTCGGATGATTCATCCAACGATTCCAACACAAGCAGTGCTAGCAACAACAGTGGAACCCACAACATACGGCCAACACTCACAAAGGGCTCTGAGAGATTTACGACCTCAGACAGAAAGACTCGTTTGCAGAGGAATAGAAGCCTCAATGGGTGGAACTTTCAGACACCCACTACTGACAAACAACAAACTCAAACCTCGTACCCTGGTCCTTTCACGAAATCAAATGAAGTTTTTCCACAAGTATACCAGAAAGGCACTGCAAGAAGTTGGGAATACAAGGAGATTAAAAGTAGAGATGGGAAGGCAAAGCTGAAAACCAATGTATTTTTTGCTTCCTTTGACCAAATGAGTGAAAAAGCTTGTGGTGAGAGTGCGTGCACGGTTTTAGTTGCACTCATAGCCCATTGGCTTCACTCAAACCATGGTATGCCAACGAGAGCGCAATTCGAAAAACTCATCACACAAGGTTCATCAGAATGGAGAAGGCTATGTAACAGTGATTACTACTCGAAGCTCTTCCCAGATAAACATTTTGACCTTGAGACGATCATCGAAGCCAATCTAAGACCTCTTGTTGTTCTGCCTCAGAAATCGTATACGGGGTTTTTCTCCCCTGAGAAGTTCCAGTGCTTAAAAGGAGCCATGTCGTTTGATGAAATTTGGGACGAGATAAAAATGAAGGTGGGTGATCATGTGCCAAGAATTTACATAGTGAGTTGGAATGATCATTTCTTTGTGTTGAAGGTAGAAAGAGATGCTTACTACATCATTGACTCTTTGGGGGAGCGACTTTTTGAGGGGTGTCAACAGGCATTCATATTGAAGTTTGATGATTCGAGTTTGATTTATAAGAAACACACCACAAAAGAGGAGCCTTCAAAGGGAGAAAGTCGTGAGATAATTTGTCGTGGAAAAGAGTGTTGTAAAGAGTTCATCAAACGCTTTCTGGCGGCTATACCACTTTGGCAAATGGAGAAGGAGGAGAAGAAATGGAGTGTTTCAAGTCCTTATCTTCATCGACAATTGCAGATCGATTTCCATTATAGCTCTTCTTCTTCTTCTTCCTCTTCCTCTTCTTCTTCATCATCTTCTTCTTCTTCTGTAACTTCAACTGATTCTTTGTGGTCTCTCTTATCAAGTGGAACATTGAATTAG 1164 0.4167 MFDSDDSSNDSNTSSASNNSGTHNIRPTLTKGSERFTTSDRKTRLQRNRSLNGWNFQTPTTDKQQTQTSYPGPFTKSNEVFPQVYQKGTARSWEYKEIKSRDGKAKLKTNVFFASFDQMSEKACGESACTVLVALIAHWLHSNHGMPTRAQFEKLITQGSSEWRRLCNSDYYSKLFPDKHFDLETIIEANLRPLVVLPQKSYTGFFSPEKFQCLKGAMSFDEIWDEIKMKVGDHVPRIYIVSWNDHFFVLKVERDAYYIIDSLGERLFEGCQQAFILKFDDSSLIYKKHTTKEEPSKGESREIICRGKECCKEFIKRFLAAIPLWQMEKEEKKWSVSSPYLHRQLQIDFHYSSSSSSSSSSSSSSSSSSSVTSTDSLWSLLSSGTLN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02964 387 MobiDBLite consensus disorder prediction 1 77 - -
Vimu10g02964 387 MobiDBLite consensus disorder prediction 1 34 - -
Vimu10g02964 387 MobiDBLite consensus disorder prediction 352 387 - -
Vimu10g02964 387 MobiDBLite consensus disorder prediction 48 77 - -
Vimu10g02964 387 PANTHER C2 NT-TYPE DOMAIN-CONTAINING PROTEIN 80 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02964 Vimu-Chr10 40627236 40630367 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02964 - - pvu:PHAVU_009G092800g 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02964 10 40627236 40630367 Vimu10g02964 10 40627236 40630367 ECH
Vimu1g02612 1 37730893 37734375 Vimu10g02964 10 40627236 40630367 PCT