Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02951 ATGGGAAAAGGTGGATCTCTGAGCGATAGCGTTGTGAAGAAGATCGTGCTATCCTACACTTACGTTGCCATATGGATCTTCCTCAGTTTCACTGTAATCGTCTACAACAAGTACATCCTCGACAAGAAGATGTACAACTGGCCATTCCCCATCTCCCTCACCATGATCCACATGTCCTTCTGCGCCACCCTCGCCGTCCTCCTCGTCCGTGTCTTCCGCCTCGTCGAGCCAGTTTCAATGTCACGTGAGGTATACCTTTCTTCGGTCGTCCCCATCGGAGCCCTCTACTCCCTTTCCCTCTGGCTCTCCAACTCCGCCTACATCTACCTCTCCGTCTCCTTCATCCAGATGTTGAAGGCTCTAATGCCCGTCGCTGTATACTCCATCGGCGTCCTCCTCCGCAAAGAGTCCTACAAAAATGACACCATGCTCAACATGCTCTCCATCTCCCTCGGAGTTGGCGTCGCCGCTTACGGAGAAGCGCGTTTCGACGCCTGGGGCGTCCTCCTCCAACTGGGCGCGGTTGCCTTCGAGGCCACGCGCCTCGTCATGATCCAAATCCTCCTCACCTCCAAGGGGATCTCGCTCAACCCCATCACCTCGCTGTACTACGTCGCCCCCTGCTGCCTCGTCTTCCTCTCCGTCCCCTGGATCTTCGTCGAGTACCCTGTCCTCCGAGACACCTCCACCTTCCAGTTCGATTTCGTCGTCTTCGGGACCAACTCCTTCTGCGCCTTCGCGCTCAACCTTGCAGTCTTTCTCCTCGTCGGGAAGACCTCGGCGCTGACCATGAACGTCGCTGGCGTGGTGAAGGACTGGCTCCTGATTGCCTTCTCGTGGTCGGTTATCAAGGACACCGTGACGCCGATTAATTTGTTCGGTTACGGGCTGGCGTTCCTTGGCGTGGCGTATTACAACCACTCCAAGTTGCAGGCGCTGAAGGCCAAAGAGGCGCAGAAGAAGACCGCCCAAGCCGATGAGGAGGAAGGGAGGCTGCTCGAGGAGAGAGAGGCCGACGGAATGGGCAAGAGAAACGACCAGCAGAATTAA 1050 0.5667 MGKGGSLSDSVVKKIVLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAVLLVRVFRLVEPVSMSREVYLSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLRKESYKNDTMLNMLSISLGVGVAAYGEARFDAWGVLLQLGAVAFEATRLVMIQILLTSKGISLNPITSLYYVAPCCLVFLSVPWIFVEYPVLRDTSTFQFDFVVFGTNSFCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQALKAKEAQKKTAQADEEEGRLLEEREADGMGKRNDQQN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02951 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 64 160 - -
Vimu10g02951 349 PANTHER SOLUTE CARRIER FAMILY 35 19 314 - -
Vimu10g02951 349 Coils Coil 315 335 - -
Vimu10g02951 349 MobiDBLite consensus disorder prediction 321 349 - -
Vimu10g02951 349 Pfam Triose-phosphate Transporter family 20 306 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02951 Vimu-Chr10 40483046 40484095 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02951 1 349 Organic Solute Cotransporters AT5G25400 83.668 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02951 - - gmx:100809504 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02951 10 40483046 40484095 Vimu10g02951 10 40483046 40484095 ECH