Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02927 GGTAGCGGGAGTTCTAGAAGGGCATTTGAGTTTGGGAGGACCCATGTGGTCAGACCTAAAGGGAAACACCAGGCAACTATAGTTTGGCTACACGGCCTTGGTGACAATGGCTCGAGCTGGTCCCAACTCTTGGAATCTCTTCCTCTTCCAAATATTAAATGGATTTGCCCGACTGCTCCTACACGGCCTGTAGCTATATTCGGTGGATTTCCTTGCACTGCTTGGTTTGATGTTGGAGAGATTTCAGAAGATGTTCCTAGTGATTTGGAGGGTTTAGATGCTTCTGCAGCACATGTTGCCAATCTTTTGTCAACAGAGCCTCCTAACATCAAACTTGGTATTGGGGGCTTCAGTATGGGTGCTGCAACTGCACTTTACTCAGCTACATGCCATGTTTTGGGGCACTATAGGAATGGAAACATTTACCCTATCAACTTAAGTGCTGTTGTTTCTTTGAGTGGCTGGCTTCCTTGTGCAAGGTTTGGTTTCTACCATTTGCCATATTGA 507 0.4615 GSGSSRRAFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAIFGGFPCTAWFDVGEISEDVPSDLEGLDASAAHVANLLSTEPPNIKLGIGGFSMGAATALYSATCHVLGHYRNGNIYPINLSAVVSLSGWLPCARFGFYHLPY 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02927 168 Gene3D alpha/beta hydrolase 4 164 IPR029058 -
Vimu10g02927 168 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 160 - -
Vimu10g02927 168 SUPERFAMILY alpha/beta-Hydrolases 15 160 IPR029058 -
Vimu10g02927 168 Pfam Phospholipase/Carboxylesterase 15 158 IPR003140 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02927 Vimu-Chr10 40329019 40332183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02927 1 160 Acyl Lipid Metabolism Gene Families AT5G20060 78.882 8.07e-94 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02927 K06130 - gmx:100811642 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02927 10 40329019 40332183 Vimu10g02927 10 40329019 40332183 ECH