Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02926 ATGAGATTGAGAAAGGGAAGCAAAGTGGAGATCCCTGGTACTACCGATGGACCTAGTGTGGAATGGCGATGTGCGCGAATAATTTCTGGTAATGGGAACACCTACAGAGTTCAGTATGACCGTTCTAGTACAACAAGTGAGGCTAGCATAGTAAGAGTTTCAAGGAATGCCATCAGACCATCCCCCCCTCCAATTAAAGGTATTGGCAATTGGGCAGCAAATGATCACGTGGAGGTTTACAATTTTGGTTCATGGAGAGCAGCCACTGTTTTGAAATTCATCGATGGAGATTTCTTCTTGGTAAGGCTATGGGTATCTTGCAAAGAGTTAACGGTACTCAAGGTAAACATGAGGGCACGCCAGACTTTTCAAAATGGTCAATGGATTCTTATGTCAAAGGGATCTGGCAAGTCACCAGTTAGGAAGTCTAACTTGATTTCTAACAGTTCCAAGGATCAGCCTGAAAATAAATGCCGAAATATTTTTTCTCGAGGATTAGATGCCAGTGATCACCAGGAACGCCTGGTCTCATCTTCAACGTTGAAAAGAATGTCCCCTTTTGTCTCCTCTTATCCCAGAAAATTAAGGACTATGTCGAATATGGGTGAGTGTGAAAGATTCAAAGTTGTAACTACAGCCCCCTTGCTGCAAAAGGTACATGCTGTTGTTTACCCACAAAATAATATGGGTGAAAAATGCATGCATACTTCCTTTACTAATGGTACCAACAAATATTATGAAACAGGAAAGGAGAATTCTTGTAATGTTTCAACACACTTTCTTGAACGAATTGAAGAACCTGATTATTCTTGTAGTGATCTGAGTTCTGTTGGCAGTTGTAGTGTGATTAGTAGTAACTCAAATAAAATTTCCAGTTATACCTTAGCAGGTCCTTGCCAAGATGAAGATACCCTTTGCAGTGACGCAGAATCTCTAGATGTTGGAGATGTGGATAAAGGATGCTCCACTTCTACCAGTGAGGTTGCAGCAGAAACAATTCATAGGTTTGAGTTGAATGCATACCACAGTACCCTAGAAGTTTTGTATGCCTCTGGTCCTTTAAGTTGGGAAAAAGAAGAAATATTGACTAACCTTCGTATTTTACTCAATATTTCAAATGATGAACATTTGATGGAGATAAAGAACTTAGGTTCATGTGGTCAGAATTTTTAA 1173 0.3998 MRLRKGSKVEIPGTTDGPSVEWRCARIISGNGNTYRVQYDRSSTTSEASIVRVSRNAIRPSPPPIKGIGNWAANDHVEVYNFGSWRAATVLKFIDGDFFLVRLWVSCKELTVLKVNMRARQTFQNGQWILMSKGSGKSPVRKSNLISNSSKDQPENKCRNIFSRGLDASDHQERLVSSSTLKRMSPFVSSYPRKLRTMSNMGECERFKVVTTAPLLQKVHAVVYPQNNMGEKCMHTSFTNGTNKYYETGKENSCNVSTHFLERIEEPDYSCSDLSSVGSCSVISSNSNKISSYTLAGPCQDEDTLCSDAESLDVGDVDKGCSTSTSEVAAETIHRFELNAYHSTLEVLYASGPLSWEKEEILTNLRILLNISNDEHLMEIKNLGSCGQNF 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02926 390 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 2 357 - -
Vimu10g02926 390 SMART ENT_2 329 390 IPR005491 -
Vimu10g02926 390 MobiDBLite consensus disorder prediction 134 155 - -
Vimu10g02926 390 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 329 390 IPR005491 -
Vimu10g02926 390 Pfam Agenet domain 6 63 IPR008395 -
Vimu10g02926 390 SMART agenet_At_2 69 125 IPR014002 -
Vimu10g02926 390 SMART agenet_At_2 1 66 IPR014002 -
Vimu10g02926 390 Gene3D ENT domain 323 385 IPR036142 -
Vimu10g02926 390 SUPERFAMILY ENT-like 331 383 IPR036142 -
Vimu10g02926 390 Pfam ENT domain 331 382 IPR005491 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02926 Vimu-Chr10 40318488 40319832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02926 - - gmx:100812171 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02926 10 40318488 40319832 Vimu10g02926 10 40318488 40319832 ECH