Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02909 ATGGAAAGTGAGAATATGGTGATTCCATGCTTTGATTTCTGCAAGGGTGGGATGAGATTGGAAGAAGGGAGTGAGGAGTGGAAAGAAATGAGCAAGAAGGTGAGAGAAGCGTGTGAGAATCACGGTTGCTTCATCTTGAGGTGTGATGAGATCATCCCCAAAAGTGTTTGTGAAGAAATGTTTCATCACATGAAAGCTTTGTTTGATTTGCCTGAAGAAACGAAACAACAATACATAACTCCAAGGCCTTATAGGAACTACAATGGCAAGAACTCTGTCATTCCCCTCTGTGAAAGCTTTGGCATTGATGATATTCCTTTCTCAGATAAGGCTGAAGCCTTCACTAACCTCATGTGGCCACAAGGAAACCCACCTTTCTGTGAGACACTAAAGACCATGAGCTTGAAGATGGTAGAGCTAAGTTTCCTTGTATTGAAAATGGTAGTGGAAGGTTATGGTCTTCCCCAACATTACATTTCAGATGCTGAAAACATGAAAAACTCTAGCTATTCACGATTGATCAAGTACAAAGTTTCTGAAAGCAATAATGAATGTGAAACTTGTCTTCCACCTCACACAGACAGCAGTTCTTTAACCATTTTATGCCAGAAAGATGTTCAAGGACTTCATGTATTATCCAAAACAGACAAATGGATTGAATTAGAGATACCCCATGATGGATTTGTAGTCCTTGTTGGTGATATACTAAAGGCATGGAGCAATGGGAGACTTCATGCAGTCACACACAGAGTGGCGTTGAGAGGAGTGAAAGAGAGATACTCATTTGGACTTTTTGCAAACCCAAAGGAAGAGATGAAAATTGAGGTTCCCGATGAGTTGGTGGACAATCAGATTCATCCCTTACGTTATCGTCCATTCAATTATGGAGAGTATTTCAACTACTTTGTTACAAATCCCATGGAAGCTCTTGAAGTGTTCGCAAGTATTTGA 951 0.4038 MESENMVIPCFDFCKGGMRLEEGSEEWKEMSKKVREACENHGCFILRCDEIIPKSVCEEMFHHMKALFDLPEETKQQYITPRPYRNYNGKNSVIPLCESFGIDDIPFSDKAEAFTNLMWPQGNPPFCETLKTMSLKMVELSFLVLKMVVEGYGLPQHYISDAENMKNSSYSRLIKYKVSESNNECETCLPPHTDSSSLTILCQKDVQGLHVLSKTDKWIELEIPHDGFVVLVGDILKAWSNGRLHAVTHRVALRGVKERYSFGLFANPKEEMKIEVPDELVDNQIHPLRYRPFNYGEYFNYFVTNPMEALEVFASI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02909 316 Gene3D - 8 314 IPR027443 -
Vimu10g02909 316 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 268 IPR005123 -
Vimu10g02909 316 FunFam 2-oxoglutarate-dependent dioxygenase DAO 6 315 - -
Vimu10g02909 316 SUPERFAMILY Clavaminate synthase-like 7 305 - -
Vimu10g02909 316 Pfam 2OG-Fe(II) oxygenase superfamily 177 267 IPR044861 -
Vimu10g02909 316 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 298 - -
Vimu10g02909 316 Pfam non-haem dioxygenase in morphine synthesis N-terminal 8 90 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02909 Vimu-Chr10 40179910 40181200 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02909 5 298 Glycosyltransferase AT5G59530 24.590 5.28e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02909 - - gmx:100790408 517.694