Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02906 ATGACGATTTCATGTTTTGATTTTTGGAAGGGTGGAATGATAGTAGAGGAAGGTAGTGTGGAGTGGGAAGAGATGAGCATGAAAGTGAAAGAAGCATGTGAGAATGATGGTTGTTTCCTCTTGAGGTGTGATGAGATTAATTCCAAAGGTGCACGTGAAGAGCTATTTAAGAATATGAAAGCATTGTTTCATTTGCCTCAAGAAACAAAGAAACAATATATCAGTTCAAAGCCTTTCAGGAGCTTCAGCTTGTATAACTACATGCACACTCACTATGAAAGCTTTGGACTCGATGATGTTCTTCTCTCAACATCTGTGGACACCTTAGCCAACCTCATGTGGCCTCAAGGAAACCCACATTTTTGTGAGACATTAAAGGGTATGAGCTTAAAGATGTCAGAAGTAAGCTTGATGATCTTGAAAATGATTGTGGAGGGTTATGGCCTTTCCCAACATCACATTTCAGATGTTGAAAACATGAAGAGTTCTAGCGACGTACGATTAAACATGTACAATACTGACAAAAGCAATACTGGAAACAAGTATAAAGCCAATGATCACACTGATAAAAACACCTTAACCATTTTGTGCGAAAATGAAGTTCAAGGTTTGCAGGTGCTATCCAAAACAGGCACATGGATTGACATAATGATACCTGAGAATTGCTTTGTGGTTATTGTTGGTGATGCATTGAAGGCATGGAGCAACGGAAGGCTTCATGCAGCGACACATAGAGTGATAATGAGTGGAGAGAAAGAGAGATATACTTTTGGAGTTTTTGTGGCACCAACGGGAGAGATGAAGATTGAGGTGCCTGGTGGGTTGGTTGATGACAAAATTCATCCTCTTCGTTATCGTCCATTTAATTATGGAGAGTTTCTCAATTTCTTTGCTTCAACTCGCAGTCATAACATGGAAAATGCACTTGAGGTGTTTGCTGGTTTTTGA 948 0.3966 MTISCFDFWKGGMIVEEGSVEWEEMSMKVKEACENDGCFLLRCDEINSKGAREELFKNMKALFHLPQETKKQYISSKPFRSFSLYNYMHTHYESFGLDDVLLSTSVDTLANLMWPQGNPHFCETLKGMSLKMSEVSLMILKMIVEGYGLSQHHISDVENMKSSSDVRLNMYNTDKSNTGNKYKANDHTDKNTLTILCENEVQGLQVLSKTGTWIDIMIPENCFVVIVGDALKAWSNGRLHAATHRVIMSGEKERYTFGVFVAPTGEMKIEVPGGLVDDKIHPLRYRPFNYGEFLNFFASTRSHNMENALEVFAGF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02906 315 Pfam 2OG-Fe(II) oxygenase superfamily 179 261 IPR044861 -
Vimu10g02906 315 SUPERFAMILY Clavaminate synthase-like 17 300 - -
Vimu10g02906 315 Gene3D - 14 313 IPR027443 -
Vimu10g02906 315 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 263 IPR005123 -
Vimu10g02906 315 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 86 IPR026992 -
Vimu10g02906 315 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 21 293 - -
Vimu10g02906 315 FunFam 2-oxoglutarate-dependent dioxygenase DAO 1 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02906 Vimu-Chr10 40163068 40164182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02906 187 262 Glycosyltransferase AT5G59530 30.263 6.31e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02906 - - gmx:100817159 382.104