Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02905 ATGGACGACGAAGACTCAAACTCAAGCACCATCCAGAAGATTCTAGATCTTCTCTACGCCGCGGGCTTCGTCCATGCGACAGACTCCGATGCGCCACCGTCTGAAAAAGTCGCAGCCGGTCTCTCTTGGTGCATCGCCGCCATAACGCAAGACAAAACACTCGGCATTGAGGAATCTTTAGAATTAGTTGGATGCCCTCACCGTCTTCGACTCTCTCATGTCCAAGATCTTGATGCCGACGCTCTTTTTCCTGTAATTCAGTGGCTTACGTCACACCTTCCACAAAATCAAGAACACCGTGCCAGTGAGGTTTCTCATGGTGAAACTACCGTTGCAGTGGATGAGTGCAGGACTTCGATTGAGGCATTGAGTGGCAACTTGGATGAACTGGTTGCATTTGCATCTATGCCCTGTATAAATTTATTTGGTTTTGCTATTGAACGGGCATCTTATTTTGGCCTAAAGAATCAGCAGAAGATGAACGTTGTGAAGCAATTAACTACTCTACAAGAGAGAATCGGTAATGAGGGTGCTGATTCTGGGGCACAGAAGTTAATTTCTTTAATGACGTCTTTGAAGGATCTTGAAAAGCAGGAAAATTACTTTCAGTGCAATCGCGATTCTAAACACTCAGAACTTCAAGCTGATATTAGTGAATTAGAGAGGCAAATTACAAATTACAGTGATAACAAGAATCTATCTGATGGACTACATAATTCTTTTAGTGAATTAGTTGAAAAAGTCGATTTGATGAAAAAGAAACTTGCTGCTAGATTGAGGAATATTGTAGCACTAAGACGTCAGATTGATGACCTACCATGCCAATCAGAAGTCATCCAGTATGAGTCTCGGCTCTCCGAACTGTATATGCAAATCCAGGGAAAACATCGACAAACTCATAAGTACTATGCTACCTACAATGCACTCTTGGAAATAAAAGAACTGATGTTAAAGGAAGCATCTTTGTTGAATTCGATCGTTTCTCAGTTTCAAGAGGCCTTTAGTAGCACCGATGGGCGTATAAAACTAGTTCATTCCATGGAAGGAATTGTCAAGGGAAGTCAACAGAAGCTAGAAAAGGTTCATGTAGGACTTCAAGAAGAAGAAAGAATCCGCAATGATCTGAAGGGTAGGTATGCTGCAGAAGTCGGTGAGAGGAAGCGCTGCTATTACCTGTCGAAAGCTTTTCAGGTTAGCTTTTCTGTTCATCCGATGGCACGGCTTTTT 1227 0.4254 MDDEDSNSSTIQKILDLLYAAGFVHATDSDAPPSEKVAAGLSWCIAAITQDKTLGIEESLELVGCPHRLRLSHVQDLDADALFPVIQWLTSHLPQNQEHRASEVSHGETTVAVDECRTSIEALSGNLDELVAFASMPCINLFGFAIERASYFGLKNQQKMNVVKQLTTLQERIGNEGADSGAQKLISLMTSLKDLEKQENYFQCNRDSKHSELQADISELERQITNYSDNKNLSDGLHNSFSELVEKVDLMKKKLAARLRNIVALRRQIDDLPCQSEVIQYESRLSELYMQIQGKHRQTHKYYATYNALLEIKELMLKEASLLNSIVSQFQEAFSSTDGRIKLVHSMEGIVKGSQQKLEKVHVGLQEEERIRNDLKGRYAAEVGERKRCYYLSKAFQVSFSVHPMARLF 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02905 409 Coils Coil 210 230 - -
Vimu10g02905 409 Pfam CCDC93, coiled-coil domain 56 134 IPR019159 -
Vimu10g02905 409 PANTHER FIDIPIDINE 3 100 IPR039116 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02905 Vimu-Chr10 40145211 40149587 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02905 - - gmx:100806690 566.229