Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02874 TTGCTAATCCCAAAACATTGCATCCACTTCGTTGACGCGAATGCGACCAAGATGCCGAGAATGGAGGACATTCTGAACCTTCCTGTGCAAGATCCTATTTGTAAAGAGTTTTCTGCTGCTCACATAAATTGGGTTAGATTGGAAGGTGGTCGCCAAGGTGGTGATGATATTGCTCTCATTCCTTTTGCCAGAGTTGATGATTTTGTCAAAGGGGAATCTTTCAATCCCGAATGCCCTGCGAGTTTTCGCATAGAATCAAGGAGGAAGAGACCTGAAGGAAGCATTGCCAAACCAAGGGTTGATGGTTACCTTGAATACACTCTATACTGGTGTTCTTATGGTCCCGAAGACTACCGAGACAGCGACTCAGGTGTAGGAGATGGTATGAGCTCCAAGCCTACTTCGGGGAAGGGGAGCAGGCCGGGGAGGCGTCACATGATGAGAGGGTGCCTTTGCCATTTCACTATTAAAAGACTTTACACCAGGCCTCTCCTTGCACTAATCATATATAACCAAAAAAGGCACGTAGATAAATCAGGGGCACCATGTCATGGATTGCTTGACAGGGATGCCGTGGGGACGAGAGCCATGTATGCTCCACGAATTTCAGATGAGTTACGCCAGAAAGTGATGTCTTTGCTTTATGTTGGAATATCTTTGGACAAGATAATACAGCACCATACAGAGGAGATGCAGAAGCAAGGTGGGCCCCAAAACCGTGATGGTTTTCTCACTCGAAATGATGTACGTAACATGGAAAGGACTATTCGTAATTCTTCACATGAGCTACACGAAAATGATGAACACAGTGTAAATATGTGGGTTCAGAGGCATCAGAAGCATGTTTTCTATTTTCAAGATAACTCAGCTTCAGAACCATTTGTGTTGGGTATACAAACAGATTGGCAGCTGCAACAAATGCTCCGTTATGGAAATAATAGTTTAATTTCGTTTCATTCAGGTTTTGGCTTGAAAAAGCTCAAGTATCCTGTATGTTCTTTACTTGTTTTCAATTCATTCCAAAATGCAATTCCGGTTGCCTGGATCATCACCTCATCTTTTGTTGGTAAATCTATTCATAAGTGGATTGTATTGCTATCTGAAAGATTAAGAACGAAGGATCCCAGATGGAGGCCAAATGCTATTTTGTTAGATGATCCATCTTTGCAATTTTCTATCATAAGAGAGGCTTTCCAGTGCCGCGTCCTATTATGTGCTTGGCATGTTCGCCGTACTTTGATTAAAAAACTCATCAAAAAATGCTGCAACTTCGAGGTGCAACGTGAGATGTTTATGCATTTGGGATGGATTCTGTACTGTACAAAATGTGGGTCAAATGCTATGGATTCTGTTGAAGAGTTTATTCAAATTTTTGTTGACCAGTGTGCCTTTATGGACTATTTCAAAAACCATTGGCAAACTAGAATAGATATGTGGATTGATGCAATAAAATCATTCCCGGTGACAACCCCTGAGACCCATGCTGCAATAGAATCCTATCACCTAACATTAAAATCTATGCTTCTGAAGGAGGTTTGTGGTAATTTCTGGCTAAGAGTTGACTGGTTAATCCATGCTTTAACTACCGAATTTCACTCGTTATACTGGTTGGATCAGTACAGTCTAGAGACAGGGTATTTTGAGAATGTAAAGGACAATTCTTTCTCCCCTAATGCTTGGAATCATGCTCTCCATATTCCTGATGTTGACGTGATGCTGGATGAGCAAAATCTCCATCTTGCCAAAGTTTTATCCCAGACTGACAGAAGCTTGGTATATACAGTTTGGAATCCTGGTTCAGAATTTTCACTTTGTGATTGTTCCTGGTCTAGGTTGGGAAACCTCTGTAAACATGTCATCAAAGTGGCAAATTTCTGTAGATATCGGCAGGTTGCAAAACCATCATTGTCTGCTCAAGTTTATAAACAGAATTTGCTCACCCTTCTCCAAAATCCTCCTGATGATCCTTTAGTTCTGGACCATACCATTCTACATGTGGCCCGTTTGCAACAAGACATTAAGGCCTTGGAAGACTTGTCCAACAGTGGATTGCTCCAGCCTATATCTCTTGATTTAAGTTCTCAAATGGCTGAAAATCCTCTGCTTTTTCAACAATCCAGTGACTGGCCCATATTGAAAATAGATTGA 2148 0.4153 MLIPKHCIHFVDANATKMPRMEDILNLPVQDPICKEFSAAHINWVRLEGGRQGGDDIALIPFARVDDFVKGESFNPECPASFRIESRRKRPEGSIAKPRVDGYLEYTLYWCSYGPEDYRDSDSGVGDGMSSKPTSGKGSRPGRRHMMRGCLCHFTIKRLYTRPLLALIIYNQKRHVDKSGAPCHGLLDRDAVGTRAMYAPRISDELRQKVMSLLYVGISLDKIIQHHTEEMQKQGGPQNRDGFLTRNDVRNMERTIRNSSHELHENDEHSVNMWVQRHQKHVFYFQDNSASEPFVLGIQTDWQLQQMLRYGNNSLISFHSGFGLKKLKYPVCSLLVFNSFQNAIPVAWIITSSFVGKSIHKWIVLLSERLRTKDPRWRPNAILLDDPSLQFSIIREAFQCRVLLCAWHVRRTLIKKLIKKCCNFEVQREMFMHLGWILYCTKCGSNAMDSVEEFIQIFVDQCAFMDYFKNHWQTRIDMWIDAIKSFPVTTPETHAAIESYHLTLKSMLLKEVCGNFWLRVDWLIHALTTEFHSLYWLDQYSLETGYFENVKDNSFSPNAWNHALHIPDVDVMLDEQNLHLAKVLSQTDRSLVYTVWNPGSEFSLCDCSWSRLGNLCKHVIKVANFCRYRQVAKPSLSAQVYKQNLLTLLQNPPDDPLVLDHTILHVARLQQDIKALEDLSNSGLLQPISLDLSSQMAENPLLFQQSSDWPILKID 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02874 715 ProSiteProfiles Zinc finger SWIM-type profile. 593 627 IPR007527 GO:0008270
Vimu10g02874 715 PANTHER ZINC ION BINDING PROTEIN 18 687 - -
Vimu10g02874 715 MobiDBLite consensus disorder prediction 122 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02874 Vimu-Chr10 39932282 39935840 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02874 - - pvu:PHAVU_009G098900g 1327.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02874 10 39932282 39935840 Vimu10g02874 10 39932282 39935840 ECH