Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02852 ATGTTTATGGTTTTGCTAATTCCTTTTAAAATTTTGCAGGCCTGCCTACTTCCTGCTCCCAAGGGAACTTCTTGTGCTAACTATGCCAGATGTGTAAATCAAATCTTACAGGGTGCAAATAATATTCAGTTGTGGCTGAGGATTCCATTGGTTAAACCTGATGTTGACTCTATGGATGAAAAATCTGTTACTTTGGATGACTCATGGGAATCTTGGAATTCGTTTCGTCTGCTGTGCGAGCATCATAGTCAACTGTCAGTTGCACTTGATATTTTGAGCACTCTTCCTTCCACAAATTCACTTGGACGGTGGTTTGGGGAGCCTGTCAGAGCAGCTATATTAAATACTGATTGCTTCCTAACTAATTCTCATGGATGTCCATGCCTCTCCAAGCGTCACCAGAGGTTAATATCCGGTTTTTTTAACCATTCTATTCAGATCATTATATCTGGAATTTCTGTTCATCCAAAAGCAAGTATGGATGCAAATGAAACTTCTGATATAAATTCACAAAGACATCCCTTGCGGCCCTATCTGGACTATATTGGATATCTATACCAAAGAATGGGTCCTCTTCCTGAGCAAGAACGTTTTGAGCTTGGTTACAGGGATTTTTTACAGTCACCCTTGCAACCTTTGATGGATAATTTAGAAGCTCAGACTTATGAGACTTTTGAGAAAGATGCAGTTAAATACATTCAGTATCAACGAGCAGTTAGTAAAGCATTATTGGACAGAGTTCCTGATGAAGAGGCATCTGCTAAAATCATTGTATTGATGGTTGTTGGGGCAGGGCGTGGGCCTCTTGTGCGAGCGTCATTGCAGGCCGCTGAAGAAACTGGGCGGAGGCTCAAAGTTTATGCTGTTGAAAAGAATCCAAATGCAGTTGTTACCCTGCATTCATTGGTCAAGTTAGAAGGATGGGAGGACATTGTCACCATAGTCTCTAGTGACATGCGACATTGGAATGCCCCTGAAAAAGCTGACATATTGGTTAGTGAATTGCTAGGTTCTTTTGGCGACAATGAGCTTTCTCCCGAGTGCCTCGATGGAGCCCAAAGGTTTCTAAAGCAAGATGGAATTTCAATACCATCTTCGTATACAAGTTTCCTCCAACCAGTGACAGCTTCGAAGTTGTATAATGATGTTAAGGCGCATAAAGATCTTGTACATTTTGAAACTGCTTATGTTGTGAAACTACACAATGTTGCCAGACTTTCACCATCTCAACCTGTTTTTACATTTTCTCATCCAAAAAGCCCTGAAAATGAAAGCAATCAGCGTTATAAAAAATTGAGTTTTGAGATTCCAAGTGACACTGGATCTGCAATGAATCCAATTTTGGGAATTTTTGTATCTAAGATTGATGTTGTGTTCTCCTTGATTACAGGATTTGCTGGTTACTTTGATGCAACACTTTATAAGGATGTGCATCTTGGAATTGAACCTTCAACAGCAACACCAAACATGTTCAGCCCTGGTTCTACTCTCGAAGTTCATTTTTGGCGCTGTTGTGGTTCTACCAAGGTGTGGTATGAGTGGGGAGTTACTTCTCCTTCGTCGTCTCCAATTCACAATAGCAATGGACGTTCATACTGGGTGGGGCTTTAG 1611 0.4097 MFMVLLIPFKILQACLLPAPKGTSCANYARCVNQILQGANNIQLWLRIPLVKPDVDSMDEKSVTLDDSWESWNSFRLLCEHHSQLSVALDILSTLPSTNSLGRWFGEPVRAAILNTDCFLTNSHGCPCLSKRHQRLISGFFNHSIQIIISGISVHPKASMDANETSDINSQRHPLRPYLDYIGYLYQRMGPLPEQERFELGYRDFLQSPLQPLMDNLEAQTYETFEKDAVKYIQYQRAVSKALLDRVPDEEASAKIIVLMVVGAGRGPLVRASLQAAEETGRRLKVYAVEKNPNAVVTLHSLVKLEGWEDIVTIVSSDMRHWNAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYTSFLQPVTASKLYNDVKAHKDLVHFETAYVVKLHNVARLSPSQPVFTFSHPKSPENESNQRYKKLSFEIPSDTGSAMNPILGIFVSKIDVVFSLITGFAGYFDATLYKDVHLGIEPSTATPNMFSPGSTLEVHFWRCCGSTKVWYEWGVTSPSSSPIHNSNGRSYWVGL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02852 536 PIRSF PRMT5 8 536 IPR007857 GO:0006479|GO:0008168|GO:0035246
Vimu10g02852 536 Gene3D - 9 190 - -
Vimu10g02852 536 Pfam PRMT5 TIM barrel domain 12 188 IPR035247 -
Vimu10g02852 536 Gene3D Vaccinia Virus protein VP39 191 365 IPR029063 -
Vimu10g02852 536 Pfam PRMT5 arginine-N-methyltransferase 194 363 IPR035075 -
Vimu10g02852 536 Pfam PRMT5 oligomerisation domain 366 454 IPR035248 -
Vimu10g02852 536 Pfam PRMT5 oligomerisation domain 461 534 IPR035248 -
Vimu10g02852 536 FunFam Protein arginine N-methyltransferase 5 198 365 - -
Vimu10g02852 536 Gene3D - 366 536 - -
Vimu10g02852 536 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 11 536 IPR025799 GO:0016274|GO:0018216
Vimu10g02852 536 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 206 514 IPR025799 GO:0016274|GO:0018216
Vimu10g02852 536 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 221 535 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02852 K02516 - gmx:100782245 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02852 10 39801871 39814250 Vimu10g02852 10 39801871 39814250 ECH