Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02849 ATGGCCATTCTCCACTGCACTCCACTTCCGTTTCTTTCCCTCAGAACCACCCTCTATTCCGCTAAGACCACGTTAACCTTAACACTCACAAACCCAACAACAACAAAAACAAGAAACCCGTTGTTCCTGGCGATGAACACGCTCGCGAAATCCGAACCCGTGTCGTCTTCAGGCTCTTCTTCGTCAACGTACGAGGTGCCTGAGCTAGATGCTAACGACATGGACCGCGTTGCGGACAACGCGTTTCGAAGGTACACGTGGAACACCAAGAGGAGTGGCAAAGGAACGGCCATTGTATGGTTCAGGAATGATCTCAGAGTTTTGGATAACGAAGCTCTCTACAAGGCATGGCTTTCCTCCGAAACCGTTTTACCTGTCTACTGCGTTGACCCTCGACTTTTTGCCACTACTTATCATTTCGGCTTTCCCAAAACCGGTGCATTGAGAGCGCAATTTCTCCTTGAATGTGTGGTGGACTTGAGGAAGAATTTGATGAAAAAGGGGCTTAATTTGCTTGTACAACATGGGAAGCCTGAGGAGATTCTTCCTTCTCTTGCCAAAGCATTTCAAGCTCACACAGTGTATGCACAGAAAGAAACGTGCAGTGAGGAGCTGAATGTTGAACGGTTAGTCATGGAAGGTCTTAAACAAGTTGCGACAACATCAGGAGAATCAAGTGGTGTCACAGTTTCAAACAACATCCTTAAATTGCAATTAGTTTGGGGTACCACCATGTACCATCTTGATGACCTCCCTTTTGATGCCACTTCTTTGCCAGATATGTATACTCAATTTCGCAAGGCACGATATTCTGAATCTGGGTTTCTTTTCACTGCCACAAATATTATTGAAGCCAAATGTACCATACGCTCATGCATCAAACTACCACCATCTCTTGGACCGCCTCCCTTGATTGAGGATTGGGGATGCCTTCCTTCATTAGAACAGCTTGGACTTTGCTCACAGAGTGTTATCAAGGGAATGAAGTTTGTGGGGGGTGAAACTGCAGGATTGAGCAGAGTATATGAATACTTCTGGAAGAAGGATTTGCTGAAGGTATATAAAGAGACCAGGAATGGGATGTTAGGGCCTGATTATTCTACCAAATTCTCACCATGGCTTGCCTCAGGAAGTTTGTCTCCTCGTTTCATATATGAAGAGGTTGAGAAATTTGATGTCTCTGGTGTTTACAGAGTTATGCTTTTAAATTCATCTGGTTTTGATGTGCAAGTGGTCCTAGGAAAGTTCATCGCAACTGGAGCCAAGACAAGAATTTGTTTGAATCCTGGAGAGATGGTTGTACCGGGTACAATTTCTATCCGAGATTCAGAGTATCCTCTCATAGATGCCAACATGAAAGAACTCTCGACTACAGGGTTTATGTCTAATCGAGGACGACAGATTGTATGTTCCTTTCTTGTTCGTGATATGGGCATAGATTGGCGCATGGGAGCAGAATGGTTTGAGACGTGCCTTTTGGATTATGATCCATGTTCTAATTATGGAAACTGGACTTACGGATCAGGAGTTGGGAATGATCCCAGAGAAGATCGGTATTTCAGCATCCCAAAACAAGCACAAACATATGACCCTGAAGGTGAGTATGTTGCATTCTGGTTGCCACAATTGCAAAAAATCCAAAAGGAGAAAAGGAACTTCCCTGGAAATATGTACATTCCTCAAATTGTGCCTCTCAAGTTTGGAACAATTACTGGAAACAACAAGGATCATAGGTCTCTTGGTGCAAGAAGAATCAACCATAAAGGAAATGAAAGAAAATTGAACTTTCAAAAGAAATGA 1800 0.4356 MAILHCTPLPFLSLRTTLYSAKTTLTLTLTNPTTTKTRNPLFLAMNTLAKSEPVSSSGSSSSTYEVPELDANDMDRVADNAFRRYTWNTKRSGKGTAIVWFRNDLRVLDNEALYKAWLSSETVLPVYCVDPRLFATTYHFGFPKTGALRAQFLLECVVDLRKNLMKKGLNLLVQHGKPEEILPSLAKAFQAHTVYAQKETCSEELNVERLVMEGLKQVATTSGESSGVTVSNNILKLQLVWGTTMYHLDDLPFDATSLPDMYTQFRKARYSESGFLFTATNIIEAKCTIRSCIKLPPSLGPPPLIEDWGCLPSLEQLGLCSQSVIKGMKFVGGETAGLSRVYEYFWKKDLLKVYKETRNGMLGPDYSTKFSPWLASGSLSPRFIYEEVEKFDVSGVYRVMLLNSSGFDVQVVLGKFIATGAKTRICLNPGEMVVPGTISIRDSEYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGSGVGNDPREDRYFSIPKQAQTYDPEGEYVAFWLPQLQKIQKEKRNFPGNMYIPQIVPLKFGTITGNNKDHRSLGARRINHKGNERKLNFQKK 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02849 599 Pfam DNA photolyase 97 271 IPR006050 -
Vimu10g02849 599 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 442 571 - -
Vimu10g02849 599 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 94 273 IPR036155 -
Vimu10g02849 599 Gene3D HUPs 61 242 IPR014729 -
Vimu10g02849 599 PRINTS DNA photolyase signature 463 481 IPR002081 -
Vimu10g02849 599 PRINTS DNA photolyase signature 443 459 IPR002081 -
Vimu10g02849 599 PRINTS DNA photolyase signature 502 516 IPR002081 -
Vimu10g02849 599 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 330 558 IPR036134 -
Vimu10g02849 599 Gene3D - 243 401 - -
Vimu10g02849 599 PANTHER CRYPTOCHROME 95 391 IPR002081 -
Vimu10g02849 599 Pfam FAD binding domain of DNA photolyase 445 552 IPR005101 -
Vimu10g02849 599 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 95 228 IPR006050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02849 Vimu-Chr10 39765630 39770296 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02849 K25656 - gmx:100783312 877.47