Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02847 ATGGGTTTCGGAAAGTCTTCTCTTCTGGCAGTGGCTCTGCTTCTGGCCGTCTGCAGAAGCATCCAAGCATTGGATGTGCTGCAGGCGCTCAACAATCCTCAGTATGAGCAGTTCAACAAAGCCCTAACCGAGGCCAATCTGGTTGACAAAATAAACGCCCTTAAAGCCGTCACCGTTCTCCCCTTGTGCAACGACGCCATGGCTTCCCTCGCCGGCAAGTCACCGGAATTTGTGAAGGCCACCATCAGCTCGCACGTCCTTATCGGCTACTACGACGAGAAGAAGCTCATGGAAAACATTGGAAGCCAAACTCCCATGGAGACTCTCCTCCAATCCTCCGGCCTCGCCAAGGACAAACAGGGATACCTCCTCGTCCAGCTCGTCAACGAAGGCGAGGTTGTCTTCGGATCCGCCGCCTCTCCTGCCGGCACAGTCTTCACTGTCGGCCTTGTGCAAACCGTCGCCAAACAACCCGAAGAGTTTTCCGCTCTTGAGGTCACCAAGCCCATCCTTGTACCTGGAATTGAGAATTTGCTCTCCGTGAAAGGTAGCACGGCAGCGTCTCCTTCGGCTCTCGCTCCCGCTCCCGGTAGCAGCGACGCTTCACGCCTCTGCATGGGGCTCCTCGCTGCCGCTTCCGCTTCAGCCGCCTTCATCCTTGCCCTATACAACAGTGATCTTTCGTTTTTGGTTAACGAAATCACTCTGTTAGCTCGTGTTCGTGGAATTCAGTTGACTAAGGATGATCGCGCCAATGAGGGCTTGACATGTGGCAACCACTTCTTCACCCTAGGAAGGCGCAGTGGAAAAGCTGGCAGAAAGGCATTAGTGCGACGCTTTGTGTTTCTACGATTTGGGTTTTGCTCGCGAGATGTTGGTCACTCTTCACCGTTGCGAATGAAGAAGCTTCACGACAATGTTGTTCAAAGTCGCGAGGAACTCGCGATTCGGTTTCGCGATGCTTGTGATGGAGTGTTTGTAATAGCGGTGCGACCAATGTGTAATATTTTCAAAATGTCTGATAATAGAGGTGCGAAGATGGTGGCTGACTGTGAGGGGTTAGGTGGTGACTCGGGTTTTTGTGTAGAATGA 1092 0.5275 MGFGKSSLLAVALLLAVCRSIQALDVLQALNNPQYEQFNKALTEANLVDKINALKAVTVLPLCNDAMASLAGKSPEFVKATISSHVLIGYYDEKKLMENIGSQTPMETLLQSSGLAKDKQGYLLVQLVNEGEVVFGSAASPAGTVFTVGLVQTVAKQPEEFSALEVTKPILVPGIENLLSVKGSTAASPSALAPAPGSSDASRLCMGLLAAASASAAFILALYNSDLSFLVNEITLLARVRGIQLTKDDRANEGLTCGNHFFTLGRRSGKAGRKALVRRFVFLRFGFCSRDVGHSSPLRMKKLHDNVVQSREELAIRFRDACDGVFVIAVRPMCNIFKMSDNRGAKMVADCEGLGGDSGFCVE 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02847 363 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6 180 IPR033254 -
Vimu10g02847 363 Gene3D FAS1 domain 24 156 IPR036378 -
Vimu10g02847 363 SUPERFAMILY FAS1 domain 30 116 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02847 Vimu-Chr10 39755117 39757221 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02847 - - pvu:PHAVU_009G1004000 228.794