Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02831 ATGGTTTACTTCGAAGGAGAAAAGGAACACAGAGACCTTATTCCGGGTTTGCCCAACGAAGTTGCAGAGCTATGTCTTCTTCACGTTCCCTACCCTTACCAGGCTCTCTCGCGCTCTGTTTCTTCCACCTGGAACAGAGCAATAACCAATCCCTCTTTTATCTTCTCAAAGAAAACGCTTTCCCACCCCAACCTTTTCGTTCTCGCCTTCCATTCCCAAACCGGAAAGCTTCAGTGGCAGGCGCTTGATCCTTCCTCTGCCCGTTGGTTCCTTCTTCCTCAAATGCCCTCGCCGGAGGACACCATGCCGCTTGCCTGCGCCGCCTTGCCACGCCAGGGGAAGCTCTTCGTCGTCAACGGCACAAAAACGCTGACCTACCGCGCCGCCACGAATCAGTGGTCGGTGGCTGGGGGACCCGGGAGGAGGGAGTTCGAGTTCGTGGCTGCCGAAGGAGTGGAGGGAAAGATCGTGGCGGTGGGGAGAGGCGGCACCAGTGTGTACGATCCTGAAAGCAACACATGGCAGGAGGGGAGTGAGTTGGAAGGGGAGTTGGAGAGGTACGAGGCTGTGGCGGCAGGGGGAAGGGTATACGTGACGGAGGGGTGGTGGTGGCCGTTCATGTTCCGGCCTAGGGGCTGGGTTTACGAGATGGAGAGGGACACGTGGCAGGAGATGGGCATAGGAATGAGAGAAGGGTGGAGTGGGGTGGGTGTGGCGGTTGGCGGAAGAGTTTTTATGATTGCCGAATATGGAGATTCGCCGGTGAAGGTATACGACGAGGTTCATGACACATGGTGTCCTGTGGCAGGTGGTAGATTTCCAAGAGAAGTTATGAAGAAGCCTTTTTGTGCCACGGGGTTGGATGACAGAATCTACGTGGCATCTTGTGGGTTGAACGTGGCAATAGGAATTGTTGAGAAGGTTTCGAACATGGAACAAGATGTCAAAGGTTCTACTGCTGACTTGTGTGTGACGTGGCAGGTGGTGGAGGCTCCGCGTGCGTTTCGCGAATTCTCACCTTGTAGCTGCCAAGTGATGTATGCATGA 1047 0.5501 MVYFEGEKEHRDLIPGLPNEVAELCLLHVPYPYQALSRSVSSTWNRAITNPSFIFSKKTLSHPNLFVLAFHSQTGKLQWQALDPSSARWFLLPQMPSPEDTMPLACAALPRQGKLFVVNGTKTLTYRAATNQWSVAGGPGRREFEFVAAEGVEGKIVAVGRGGTSVYDPESNTWQEGSELEGELERYEAVAAGGRVYVTEGWWWPFMFRPRGWVYEMERDTWQEMGIGMREGWSGVGVAVGGRVFMIAEYGDSPVKVYDEVHDTWCPVAGGRFPREVMKKPFCATGLDDRIYVASCGLNVAIGIVEKVSNMEQDVKGSTADLCVTWQVVEAPRAFREFSPCSCQVMYA 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02831 348 CDD F-box_AtAFR-like 13 53 - -
Vimu10g02831 348 Gene3D - 55 328 IPR015915 GO:0005515
Vimu10g02831 348 SUPERFAMILY Kelch motif 65 295 IPR015915 GO:0005515
Vimu10g02831 348 PANTHER OS02G0202900 PROTEIN 10 346 IPR045887 -
Vimu10g02831 348 SUPERFAMILY F-box domain 10 93 IPR036047 GO:0005515
Vimu10g02831 348 SMART fbox_2 17 57 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02831 Vimu-Chr10 39616861 39619175 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02831 - - vra:106761094 710.679