Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02826 ATGGAAGATTCCCAGTTTGACATCATAATCGTCGGAGCTGGCGTCATGGGCAGCGCCACCGCCTACTACGCCGCCAAACGCGGTCTCAGGACCCTTCTCCTCGAGCAATTCGACTTCCTCCACCACTGCGGTTCTTCCCACGGCGAATCCCGCACAATCCGCGTCACCTACATCCAAAAACACTACTACCCTTTGGTCATGGAGTCTTACAACCTCTGGCAAGAGGTCGAGGCCCAAGTGGGCTACCAGGTATACTTCAAGGCCCAACACTTCGACATGGGCCCCTCTCACGATCCCACAATCCGCTCTGTCGTCGACTACTGCCAGACCCATGCCATCCCCTTCCAACTCCTCCACCGCCACCAAGTTGCGGAAAAATTCGCCGGCCGCATCGACATCCCAGAGGATTGGGTGGGTGTCTCCAATGAGTATGGCGGCGTCATCAAGCCAAGCAAAGCCGTCGCTATGTTCCAGACACTGGCCTACAAAAACGGCGCCGTCTTGGTGGACAAAGTCAAGGTGGTGGACATCAAGAAAAGCAAAGAGGGAGAGGGCGTGGAAGTTTTCAGCTCAAGCGGCAAGAGATTCCGCGGGAAAAAGTGTGTGGTAACTGTAGGCGCTTGGGCGCAGAAATTAGTTAAAACGGTTAATGGGGTTGAACTCCCGATAGTGCCATTGGAGACTAACGTTTGTTACTGGAGAATAAAAGAGGGGGAGGAGGGGAAATTCCAGATAGGAACAGCCTTTCCTACGTTTGCATCCTTTGGAGACACTTACATTTACGGAACGCCAACGTTGGAGTTTCCGGGACTGATTAAGGTTGGGGTGCATGGAGGGAATCCGTGCGACCCCGACAAGAGGCCGTGGGGTCCGGCGGTGATGATGGAGGAGTTAAAAAAGTGGGTGGGAGAAAGGTTCTCGGACATGGTTGATTCCAGTGAACCTGTGATAAAACAGTCTTGCATGTACTCAATGACACCGGATGAGGATTTCGTTATTGATTTCTTGGGCGGCGAGTTCGGAAAGAACGTGGTAATTGGAGGTGGGTTTTCGGGTCACGGCTTCAAGATGGCTCCGGTTATTGGGAGGATTTTGACGGAACTTGCGGCCGATGGAGAAGCCAAAGGAGTTGATCTCAAACATTTTAGGATTGGGAGGTTCAAGATAACCTCAAAGATTTAG 1182 0.5237 MEDSQFDIIIVGAGVMGSATAYYAAKRGLRTLLLEQFDFLHHCGSSHGESRTIRVTYIQKHYYPLVMESYNLWQEVEAQVGYQVYFKAQHFDMGPSHDPTIRSVVDYCQTHAIPFQLLHRHQVAEKFAGRIDIPEDWVGVSNEYGGVIKPSKAVAMFQTLAYKNGAVLVDKVKVVDIKKSKEGEGVEVFSSSGKRFRGKKCVVTVGAWAQKLVKTVNGVELPIVPLETNVCYWRIKEGEEGKFQIGTAFPTFASFGDTYIYGTPTLEFPGLIKVGVHGGNPCDPDKRPWGPAVMMEELKKWVGERFSDMVDSSEPVIKQSCMYSMTPDEDFVIDFLGGEFGKNVVIGGGFSGHGFKMAPVIGRILTELAADGEAKGVDLKHFRIGRFKITSKI 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02826 393 PANTHER PEROXISOMAL SARCOSINE OXIDASE 4 390 IPR045170 GO:0016491|GO:0050660
Vimu10g02826 393 Pfam FAD dependent oxidoreductase 7 368 IPR006076 GO:0016491
Vimu10g02826 393 FunFam Monomeric sarcosine oxidase 6 91 - -
Vimu10g02826 393 Gene3D - 6 373 IPR036188 -
Vimu10g02826 393 SUPERFAMILY FAD-linked reductases, C-terminal domain 227 327 - -
Vimu10g02826 393 NCBIfam sarcosine oxidase, monomeric form 6 391 IPR006281 GO:0008115
Vimu10g02826 393 SUPERFAMILY FAD/NAD(P)-binding domain 5 387 IPR036188 -
Vimu10g02826 393 Gene3D - 89 325 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02826 K00306 - gmx:100789864 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02826 10 39589136 39591014 Vimu10g02826 10 39589136 39591014 ECH