Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02824 ATGGCTCCGAGGCTGGACTTTTCCAATTGGTGGACGAAGGATACACAGAAGGGAACACCGGTAGTGGTGAAAATGGAGAACCCCGCTTTCTCTGTTGTGGAGATCAATGGTGCAGATGCTGCATTCAGGCCAGTTGAGAAAAGCCGTGGCAAGAATGCTAAGCAAGTCACATGGGTGTTGCTTCTCAGGGCTCACCGTGCTGTTGGCTGTGTCACTTGGTTTGCCACTGTGCTTTGGGCGTTGCTGGGGGCCATTAAGAAGAGGCTGATATATGGACAAGGTGTGGCTATGGAGAGTGAGAGTGACAAGTTGGAAAAAGGCAAGTTGCTGTTTAGAGTCATTAGAGTGTTCCTAGTGACATCCTTGGCAGTTCTGGCCTTTGAGGTTGTTGCTTACCTTCAAGGTTGGCATTTTGGGAACCCCACTTTGCACATTCCTCGTACTTCTGATTTGGAAGGATTGCTCCACTTGGCTTATGTTGCTTGGTTGACGTTTCGTGCCGAGTACATTGCTCCTCCTATAAAGGCACTTTCCAAATTTTGTGTTGTTTTGTTTCTTATCCAGTCTGTGGATCGCATGGTCCTTTGCCTGGGGTGCTTTTGGATCAAATACAGGAAGGTCAAGCCAAAGATTAATGGGGATCCATTCAAGAGTGATGATGTTGAAGGATCTGCAAGCAATTATCCCATGGTTCTGGTTCAGATTCCAATGTGCAATGAGAGAGAGGTGTATGACCAATCCATTTCTGCAGTCTGTGGCATTGATTGGCCAAGGGATCGTTTACTGATTCAAGTACTTGATGATTCTGATGATGAGAGCATACAGTGGTTAATTAAGGAAGAGGTCTCTAAATGGAGCCAGAAGGGAATCAATATAATCTATAGGCATCGCTTAATAAGGACTGGATACAAAGCTGGAAATCTTAACTCTGCAATGAGCTGTGACTATGTGAAAGACTACGAATTTGTTGCTATTTTTGATGCAGACTTTCAACCAAATCCTGATTTTCTTAAGCGAACCGTGCCACATTTCAAGGGCAATCCCGAACTAGGTTTGGTCCAAGCTAGATGGTCTTTTGTGAACAAGGATGAGAATCTATTGACGCGTCTCCAAAACATAAACTTATGTTTTCATTTTGAGGTAGAACAGCAGGTGAATGGGGTATTTCTCAGTTTTTTTGGTTTCAACGGAACTGCTGGTGTTTGGAGAATCAAGGCCCTAGAAGAGTCCGGGGGCTGGCTAGAGAGGACAACTGTAGAAGATATGGACATTGCTGTCCGAGCTCATCTCAATGGTTGGAAATTTGTCTTCCTAAATGATGTAAAGGTACCATGTGAAGTTCCAGAGTCATATGAAGCTTACAGGAAGCAGCAACACCGCTGGCATTCAGGTCCGATGCAACTTTTTAGGTTGTGTCTTCCGGCAATTGTGAAATCTAAGGTGTCTGCATGGAAGAAAGCAAACTTAATCCTGTTATTTTTTCTGTTGAGGAAACTGATCCTTCCCTTTTACTCCTTCACCTTATTTTGCATAATTCTTCCTCTAACCATGTTTGTACCAGAGGCAGAGCTTCCTTTGTGGGTGATCTGCTATGTGCCTGTGTTTATGTCACTTCTTAACATTCTTCCTGCTCCAAAATCTTTTCCTTTCATTGTTCCCTACCTCCTTTTCGAAAACACCATGTCCGTCACCAAATTCAATGCAATGGTATCTGGGCTTTTCCAATTAGGAAGTTCTTATGAATGGGTTGTGACAAAGAAAGCTGGCAGGTCATCAGAGTCCGATTTACTGGCTGCTGCAGAAAGGGAAGCCAAGTCAATAGAACAACAAAAGATTCATAGAGGAGCTTCCGACAGTGACCTTATGGAGTCACAAAAGCTTGTGGAGAACAAAGAAGCAGCTCCAACAACTGTTAAGAAAACTAATAAGATATATAAGAAAGAGCTGACTTTGGCATTCCTCCTTCTCACAGCTTCTATCAGGAGTCTGTTATCTGCACAGGGAGTTCACTTCTACTTCCTGCTTTTCCAAGGGGTGACCTTCCTCCTTGTGGGGCTTGATTTGATTGGAGAGCAGATGAGCTAG 2085 0.4398 MAPRLDFSNWWTKDTQKGTPVVVKMENPAFSVVEINGADAAFRPVEKSRGKNAKQVTWVLLLRAHRAVGCVTWFATVLWALLGAIKKRLIYGQGVAMESESDKLEKGKLLFRVIRVFLVTSLAVLAFEVVAYLQGWHFGNPTLHIPRTSDLEGLLHLAYVAWLTFRAEYIAPPIKALSKFCVVLFLIQSVDRMVLCLGCFWIKYRKVKPKINGDPFKSDDVEGSASNYPMVLVQIPMCNEREVYDQSISAVCGIDWPRDRLLIQVLDDSDDESIQWLIKEEVSKWSQKGINIIYRHRLIRTGYKAGNLNSAMSCDYVKDYEFVAIFDADFQPNPDFLKRTVPHFKGNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLSFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFVFLNDVKVPCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIVKSKVSAWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPLWVICYVPVFMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKAGRSSESDLLAAAEREAKSIEQQKIHRGASDSDLMESQKLVENKEAAPTTVKKTNKIYKKELTLAFLLLTASIRSLLSAQGVHFYFLLFQGVTFLLVGLDLIGEQMS 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02824 694 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 509 IPR029044 -
Vimu10g02824 694 FunFam probable xyloglucan glycosyltransferase 5 222 447 - -
Vimu10g02824 694 Pfam Glycosyl transferase family group 2 323 529 IPR001173 -
Vimu10g02824 694 Coils Coil 590 610 - -
Vimu10g02824 694 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 221 448 IPR029044 -
Vimu10g02824 694 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 159 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02824 Vimu-Chr10 39567795 39571634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02824 1 694 Miscellaneous Gene Families AT4G31590 79.340 0.0 1129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02824 - - gmx:100790397 1331.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02824 10 39567795 39571634 Vimu10g02824 10 39567795 39571634 ECH