Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02823 ATGGAGATCCGTGCCGATGCAGAAACCAGCTCCTTCTCAAGTTTGTTCGCGGCTGTGGCATATGGGTTTGCCTCCATGGCCATGGTTTTTATCAACAAGGCTGTTCTTATGCAGTATGCATATTCAATGACTCTTCTCACTTTGCAGCAATTGGCTACCTCTTTGCTTATCCATGTTGGTAGACGTGCGGGATTCACAAAGGCGAGAGGACTGGAAATGACAACGGCCAAGCGACTTCTCCCGCTTTCAATTTTCTACAATGCCAATGTTGCTTTTGCTTTGGCCAGTTTGAAAGGAGTCAATATCCCAATGTATATTGCGATCAAGAGGCTTACCCCACTTGCTGTACTTATTGCTGGGTACTTCTCGGGAAAGGGGAGACCTACATCTCAGGTGGCTCTTTCAGTTATATTGATTGCTGCTGGAGTTCTCATTGCTGCCCTCGGAGATTTTTCCTTTGACCTTTTTGGGTATAGCATGGCTTTTGTTTCCGTTTTTTTCCAGACCATGTACCTTGTGCTGGTGGAAAGATCTGGTGCTGAGGATGGACTTTCATCCTTGGAAATCATGTTCTATAACAGTTTTTTATCTCTACCATTTTTGATGTTTCTCATCATAGCCACTGGGGAATTCCCAAAGTCTTTATCTTTATTATTTGCACAGAGTTATTCTTTTTCGTTTTTGATGGTTCTTATTCTTTCATTGGTAATGGGCATTGTTCTCAACTTCACCATGTTCTTGTGTACAATTGTTAATTCAGCCTTAACTACAACTATTGTTGGCGTTCTCAAAGGGGTTGTTTCCACGTTTAATTTGCATACCCTTTATGTTCATTTGTTTCTAGTTTTAACTGCAAGCATTAAACCCGTTGATTTGCTTCTTCAGACCCTTGGTTTCTTCTTACTGGGTGGTGTTCAAGTCCATGCTTTGAATGTGACTGGATTGGTTATCAACACAGCTGGCGGTGTGTGGTATTCATTTGCCAAATATCAGCAGAAAAGAAGTAAGTCGACGAAGCTTGTACCTGATGAGGAGGCCCATCGTAAATAG 1050 0.4219 MEIRADAETSSFSSLFAAVAYGFASMAMVFINKAVLMQYAYSMTLLTLQQLATSLLIHVGRRAGFTKARGLEMTTAKRLLPLSIFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLIAGYFSGKGRPTSQVALSVILIAAGVLIAALGDFSFDLFGYSMAFVSVFFQTMYLVLVERSGAEDGLSSLEIMFYNSFLSLPFLMFLIIATGEFPKSLSLLFAQSYSFSFLMVLILSLVMGIVLNFTMFLCTIVNSALTTTIVGVLKGVVSTFNLHTLYVHLFLVLTASIKPVDLLLQTLGFFLLGGVQVHALNVTGLVINTAGGVWYSFAKYQQKRSKSTKLVPDEEAHRK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02823 349 Pfam Triose-phosphate Transporter family 23 268 IPR004853 -
Vimu10g02823 349 PANTHER SOLUTE CARRIER FAMILY 35 15 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02823 Vimu-Chr10 39558489 39561191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02823 19 264 Lipid Metabolism Gene Families AT5G19980 27.863 4.18e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02823 K15281 - gmx:100777622 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02823 10 39558489 39561191 Vimu10g02823 10 39558489 39561191 ECH