Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02819 ATGGCGCGAGTATGGGTGAGCTCCACATTCCCGCGCGCACTTCATTTCGCGATTCTGCGCCACTCTAACTCCTCCCTCGTTATCTTCCCTGTGAAGTCTCTTTACTCTGAGATTTACGGTTGCTGGCGAAGGGAACGATCGGTGACTGGTAGTGTTAGGGCTTTTGAATCCTCTTCTGCTAAATCTATGAGTTGGTGCGATGGCGTTCAAGAACCACGGGTTCTCGTCGCGCCGGTTGTTAATGCATTTTATTTAATTGTTTATTATGCGAGTGAAGATCCTGGCACCGATGGAAATGGTCCGGGACAGATGATACTGCTCCGCCATCCCAAATCTGGAAATGCAACGCAGTATCTGTTTGCAAATGGAATGCTTCAAGAACTTCAGTGGTTTAAGAACTTGTACGGGTCTTGGTTTTTGGGAGATTATATAACTGAAGATGGTCGGTTGTATTTATCCACACCAATTGATCCTGTTTTCATCATGTTGCCTATATTTGAGGAGGCTAGAATGAAGAAAGGGGATGATCTTGGCAGGTTCAGGCAATTGGACGAGATATTATTTATTGATGGCTATCCAGGATATATGCAGTTAATGTCTGTTGTGGAGAACTGTATGCGAGTTGTTTCTGAAATCAAAGAAGTTGGATCCTCAAAATTCTTCAGACTTGATGACTCAAAGGTTCTACGTTGGCTGTGCTATAAGGTTTTTCAGCTAAAACAGACACTACCCAATTTGGACAAAAACTATGCTGTTCAATCAGAGAAAGACACATGTAAAGTGTTTACTATCATTCTGTGTTCTGTTGGCTGTTGGAGAATTTTATTCTGCCGAGTGATTGATGCCGTCTCTATATTAGGAGAGTATTTGAAGGAAAAGCCTTGGCTGGAGCTTTTGTGTAACCATCTAAAGTTAAATATACTTGAGGTTACTGGAAAAGTACAAGTATATGATGAAGGAAGTAACCCAGGTTTATGTAACGAATTACAGGAACAACGGAGTGAAGATAAGAAGGCCACAACTGCAAAGAAAGGTAGACAAGCGAAGAAGGTAAAATTGGAGACAGAATCACACAACATCAAAGATATGTTTACGAGGGCCTCCCGAAAGAAAAGCTAA 1119 0.42 MARVWVSSTFPRALHFAILRHSNSSLVIFPVKSLYSEIYGCWRRERSVTGSVRAFESSSAKSMSWCDGVQEPRVLVAPVVNAFYLIVYYASEDPGTDGNGPGQMILLRHPKSGNATQYLFANGMLQELQWFKNLYGSWFLGDYITEDGRLYLSTPIDPVFIMLPIFEEARMKKGDDLGRFRQLDEILFIDGYPGYMQLMSVVENCMRVVSEIKEVGSSKFFRLDDSKVLRWLCYKVFQLKQTLPNLDKNYAVQSEKDTCKVFTIILCSVGCWRILFCRVIDAVSILGEYLKEKPWLELLCNHLKLNILEVTGKVQVYDEGSNPGLCNELQEQRSEDKKATTAKKGRQAKKVKLETESHNIKDMFTRASRKKS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02819 372 Gene3D - 83 155 - -
Vimu10g02819 372 Gene3D - 156 304 - -
Vimu10g02819 372 FunFam Ribonuclease H2 subunit B 86 155 - -
Vimu10g02819 372 CDD RNase_H2-B 96 241 IPR040456 GO:0032299
Vimu10g02819 372 PANTHER RIBONUCLEASE H2 SUBUNIT B 65 370 IPR040456 GO:0032299
Vimu10g02819 372 MobiDBLite consensus disorder prediction 330 353 - -
Vimu10g02819 372 Pfam Ydr279p protein family (RNase H2 complex component) wHTH domain 160 244 IPR019024 -
Vimu10g02819 372 Pfam Ydr279p protein triple barrel domain 103 157 IPR041195 -
Vimu10g02819 372 MobiDBLite consensus disorder prediction 329 353 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02819 K10744 - gmx:100792495 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02819 10 39521504 39527215 Vimu10g02819 10 39521504 39527215 ECH