Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02816 ATGGTTTTCTGGGTGTTTGGCTACGGTTCACTGGTGTGGAACCCGGGGTTTGATTACGATGAGAAGATTGTTGGTTTCATTAAGGATTACAGACGCGTGTTCGATTTAGCGTGCATTGATCACAGGGGAACCCCAGAAAGCCCAGCAAGAACTTGCACTTTGGAGGAGAAAGAAGGAGCTATTTGCTGGGGAACTGCTTATTGTGTTCGAGGAGGCCCTGAAAGGGAAAAATTGGCTATGCAGTATTTGGAGCGACGGGAGTGTGAATATGACAGAAAAACTATTGTAACCTTCTTCAAGGAAGGAGATTCACAGCACCCTGCTTTGACTGACGTAATAGTATTTACATCAACTCCAGACAAAGTGAACAACAAATACTACCTTGGACCTGCCCCACTGGAAGACATGGCTAGGCAAATAGCAACTGCGTATGGTCCTTGCGGAAATAACAGGGACTATCTTTTCCTTCTAGAAAAGGCTATGCATGATATTGGCCATGAAGATAACTTAGTGATAGAGCTTGCGAATGAAGTGAGGAAAGTACTTGGAGTGGGAAATGTGCTAACAAATGTTGCAACAGCTCAACTTCCACACCCTCCTCATGTATCCATACCTGCCCGTCAACTGCAGCCACTGCCAGAACCTATTGTTTTGGATGGGTGA 663 0.454 MVFWVFGYGSLVWNPGFDYDEKIVGFIKDYRRVFDLACIDHRGTPESPARTCTLEEKEGAICWGTAYCVRGGPEREKLAMQYLERRECEYDRKTIVTFFKEGDSQHPALTDVIVFTSTPDKVNNKYYLGPAPLEDMARQIATAYGPCGNNRDYLFLLEKAMHDIGHEDNLVIELANEVRKVLGVGNVLTNVATAQLPHPPHVSIPARQLQPLPEPIVLDG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02816 220 Gene3D - 2 180 - -
Vimu10g02816 220 FunFam Gamma-glutamylcyclotransferase 2 185 - -
Vimu10g02816 220 ProSitePatterns Glycosyl hydrolases family 5 signature. 170 179 IPR018087 GO:0004553|GO:0005975
Vimu10g02816 220 CDD GGCT_like 5 110 IPR013024 -
Vimu10g02816 220 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 184 IPR006840 GO:0006751|GO:0061928
Vimu10g02816 220 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 2 110 IPR036568 -
Vimu10g02816 220 Pfam ChaC-like protein 4 180 IPR006840 GO:0006751|GO:0061928
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02816 Vimu-Chr10 39505034 39506644 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02816 K22596 - gmx:100793027 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02816 10 39505034 39506644 Vimu10g02816 10 39505034 39506644 ECH