Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02813 ATGGCTGATCAACCAAGAACTGCAGGTCCCTACTATGGTTCCTCCCATGGAACGTCCTATGGACCACCCTATGGAAGTACCAAAGAGTCCAACACCAGCAGCTACAACAACTCTACTTCATGTCAAACAGTCAGGTTCATAACTGCTGTTACTATTGGCATCTCACTCTTGCTCTTAGCTGGGTTGATCTTCACAGGTACTGTCATAGGGCTGATCCTTGCAACTCCTCTTCTTGTGATCTTCAGCCCCATCCTTGTCCCAGCAGTATTTGTGCTGTTCCTAGTTACTTCTGGATTTTTGTTCTCTGGCAGCTGTGGTGTGGCTGCCATTGCTGTTTTGTCTTGGATTTACAACTATGCAAAAGGGTACCTTGCTGAAAAGGCAAGGGATGTGAAGGAAAGGGCAAAAGATTATGGAAGCTATGCTCAGAATAAAATTCACGAGGCTACACAGGGAGCTAATTAA 465 0.4559 MADQPRTAGPYYGSSHGTSYGPPYGSTKESNTSSYNNSTSCQTVRFITAVTIGISLLLLAGLIFTGTVIGLILATPLLVIFSPILVPAVFVLFLVTSGFLFSGSCGVAAIAVLSWIYNYAKGYLAEKARDVKERAKDYGSYAQNKIHEATQGAN 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02813 154 Pfam Oleosin 42 147 IPR000136 GO:0012511|GO:0016020
Vimu10g02813 154 ProSitePatterns Oleosins signature. 66 88 IPR000136 GO:0012511|GO:0016020
Vimu10g02813 154 MobiDBLite consensus disorder prediction 11 32 - -
Vimu10g02813 154 PANTHER OLEOSIN 32 146 IPR000136 GO:0012511|GO:0016020
Vimu10g02813 154 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02813 Vimu-Chr10 39488924 39490433 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02813 36 145 Lipid Metabolism Gene Families AT2G25890 52.991 6.35e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02813 - - pvu:PHAVU_009G103600g 226.483