Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02811 ATGTCCATGGATCCTACCAAGAAACCTAACAAGATCAGAGACATAGTGAGGCTTCAACAGATTCTTAAGAAATGGAGAAGGGTTGCAAACTCTTCAAAAACAAGTACAAGTAACAGTAACAGCAGTAACAGCAGCAACAGCAGCAACAGCAGCAACAGCAACAGCACCGGCAGAAGCATCAAATTTCTGAAAAGAACACTTTCTCTGTCTGAACGTGAGGGAGGAGGATCGAGCAGTGTTGTTCCCAAGGGCTACGTTGCTGTTTGTGTTGGCGTGGACCTTAGCAGGTTCGTTATACCAACCGAGTATCTGGGTCACCAAGCTTTTCACATGTTACTCAGAGAAGCTGAGGAAGAGTTTGGATTTGAACAAACTGGGGTTCTCAGAATCCCTTGTGAAGTGTCTGTGTTCGAGAGTATCTTGAAGATAGTAGAGAGAAAGGACAAGTTTTTCACTCAGAAATGCAGGTTTAGCATTGAGAAAATGATGGGATATTGTTCCTCCAACAACCTTGCTTATTCTCATCACCCTCAAAGTCCAATGTGCAGATAG 552 0.4366 MSMDPTKKPNKIRDIVRLQQILKKWRRVANSSKTSTSNSNSSNSSNSSNSSNSNSTGRSIKFLKRTLSLSEREGGGSSSVVPKGYVAVCVGVDLSRFVIPTEYLGHQAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILKIVERKDKFFTQKCRFSIEKMMGYCSSNNLAYSHHPQSPMCR 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02811 183 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 51 140 IPR003676 GO:0009733
Vimu10g02811 183 Pfam Auxin responsive protein 25 143 IPR003676 GO:0009733
Vimu10g02811 183 MobiDBLite consensus disorder prediction 27 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02811 Vimu-Chr10 39474259 39474810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02811 6 183 Calmodulin-binding Proteins AT4G31320 53.886 1.68e-57 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02811 K14488 - pvu:PHAVU_009G103800g 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02811 10 39474259 39474810 Vimu10g02811 10 39474259 39474810 ECH
Vimu10g02811 10 39474259 39474810 Vimu1g02064 1 29017855 29018379 PCT