Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02810 ATGAGCATTGGTTACCATTTCTGGCTCTGGCACACTGTTCGAACTCAGCCACACACAACTATCATTGGCATCAATGCTAGTGGCAGACGCAATTGGGTTGCTACCATAATGAAGTTTTATGGTAGAGTGAATGGTGAGCCAAATGAGCACACGCATGAGAATAATTCAAGAATGATGAACTTTTTGCAGGACAACGACAAAAAAAACATCCTAGCTGTTCAATCACTGAGGAACACAATCATGGGTGCGACCCTAATGGCCACAACCTCTATTCTGCTATGTTCGGGCTTAGCAGCAATCATAAGCAGCACCTACAGTGTGAAAAAGCCACTTGAGGACACAGTTTATGGGGGTCATGGAGAGTTCATGGTATCACTCAAATATGTCACTTTGCTCTCCATTTTCCTCTTCTCATTCTTCTGCCATTCCTTGTCCATAAGGTTCATCAACCAAGTCAACATCCTTATCAACACCCCACAGGACCCCATGTCCTTGGTCAACCCTGAATACGTTAATCAGATCTTGGAGAAAGGCTTCCTTCTTAACACTGTTGGAAACAGACTCTTCTACGCTGCTCTTCCTCTTCTGCTTTGGATCTTTGGTCCTGTTTTAGTCTTCTTCTGCTCTCTCACTATGGTTCCAGTCCTTTACAATCTTGACTTTGTCGTTCCTGCCAAGGATAAGTTGCACGTAAATCAAAATACACATTTTGTATGA 717 0.4324 MSIGYHFWLWHTVRTQPHTTIIGINASGRRNWVATIMKFYGRVNGEPNEHTHENNSRMMNFLQDNDKKNILAVQSLRNTIMGATLMATTSILLCSGLAAIISSTYSVKKPLEDTVYGGHGEFMVSLKYVTLLSIFLFSFFCHSLSIRFINQVNILINTPQDPMSLVNPEYVNQILEKGFLLNTVGNRLFYAALPLLLWIFGPVLVFFCSLTMVPVLYNLDFVVPAKDKLHVNQNTHFV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02810 238 Pfam Protein of unknown function, DUF599 3 37 IPR006747 -
Vimu10g02810 238 Pfam Protein of unknown function, DUF599 58 222 IPR006747 -
Vimu10g02810 238 PANTHER - 1 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02810 Vimu-Chr10 39459283 39460932 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02810 - - gmx:100780305 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02810 10 39459283 39460932 Vimu10g02810 10 39459283 39460932 ECH
Vimu10g02810 10 39459283 39460932 Vimu1g02063 1 28887465 28890693 PCT