Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02806 ATGGCGCCTACGAAGCTCTTCTTCTTTGCGTTTTCAGTAGCCCTAATTTTCTCCATCGTCGGGGCCGAGGCTGATGTTTCCGTCGAAGGAAGCGTAGCAGAGCCTGATATCTCTGCCTTCAAGATCCAATTAGATCAACTCAATTCTAAGATCCGAATTCTCGAATCTGAAATCAGAGAAAAGTCAGAAGAAGTGAAGAGGAAGGACGAAATTGTGGCCGGAAAAGAAAAAATTATTCAAGATAAATCGGTCACCATACAGTCCCTGCAAAATGATATTGCTTCTCTCCAGAAAAAAGGGTCATTGGATGCTGAAGAGCAAGTCGGAAAGGCTCATGCACGGGCTGTTGAACTACAGAAGCAGGTGGACGAGCTTAAAGGGGAACTGGAAACACAAAACAGGGAGAAAGGGAACTGGGAAACTCGAGTGCTTGGGTTAGAGAAAAAAGTTAATGACTTGAACTCAAAATTAGAAGATCTTCAAAAGATAAACCAGGAGCAGAGGACACAGATTCAGAAAACGGAACGTGCTCTTAAAGTTACCGAGGAAGAGATGGTGAAGGCTAAGTTTGAGGCAGCTGTCACAGAAGCAGAGTTGAGTGCGACACGTGGTGCTTGGCTTCCACCTTGGCTTGCTGTACACTATCTTCATAGTAAGTCTTGTGTTGAGACTCAATGGAACAAACATGGGAAACCTGTTTGGGAAAAGGTTGCTCAAAAGGCCCTAGATAAGAAGGCACAAGCTGGAAAGTGGGCCGAACCTCATGTGGAAACCATTAAAACTAAATGGGTCCCTGCTGTAAAAGAACAGTGGTCTGTGGTGAAAACAAGTGCTGAACCACATTTGCAATTATTGACCACAAAAACTGTTGAAGATGTGTTTCTTAAGACTACTGGTTCACAGGAAGCTAGAAAGTTCAGCAAGCCATACATTGATCAGATTGCTGTTGCAGCTAAACCTCATGTTGATAAAGTACAAGTGGTTTTGAAGCCCTACACAAACAAAGTTGTTCATAGTTATGGGAAATTTTTGGAATCAGCTACTACATATCATCGCCAGGTCCAAGCCACTGTCCAAGAGACACTGAAAAAGCATGAGCTCACCAGACCTCTTGCTACTAAAGAGTTAGAATGGTTTGCGGCCTCTGCTCTTTTGGCTCTACCCATTATTTTTGTGGCTAGAGTGTTTTCAGCTGTGTTCTGCAATAAGAAAGTGAATAAACCTTATCGAAGTGGAAATAACCATGCGCGACGCAAAGCTAAACGAAGCCATCCAGACAAGCACACATCATAA 1293 0.4339 MAPTKLFFFAFSVALIFSIVGAEADVSVEGSVAEPDISAFKIQLDQLNSKIRILESEIREKSEEVKRKDEIVAGKEKIIQDKSVTIQSLQNDIASLQKKGSLDAEEQVGKAHARAVELQKQVDELKGELETQNREKGNWETRVLGLEKKVNDLNSKLEDLQKINQEQRTQIQKTERALKVTEEEMVKAKFEAAVTEAELSATRGAWLPPWLAVHYLHSKSCVETQWNKHGKPVWEKVAQKALDKKAQAGKWAEPHVETIKTKWVPAVKEQWSVVKTSAEPHLQLLTTKTVEDVFLKTTGSQEARKFSKPYIDQIAVAAKPHVDKVQVVLKPYTNKVVHSYGKFLESATTYHRQVQATVQETLKKHELTRPLATKELEWFAASALLALPIIFVARVFSAVFCNKKVNKPYRSGNNHARRKAKRSHPDKHTS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02806 430 Coils Coil 79 99 - -
Vimu10g02806 430 PANTHER OS08G0519400 PROTEIN 15 422 - -
Vimu10g02806 430 MobiDBLite consensus disorder prediction 407 430 - -
Vimu10g02806 430 Gene3D - 36 213 - -
Vimu10g02806 430 Coils Coil 37 71 - -
Vimu10g02806 430 Coils Coil 108 191 - -
Vimu10g02806 430 SUPERFAMILY Apolipoprotein A-I 231 365 - -
Vimu10g02806 430 SUPERFAMILY Tropomyosin 33 200 - -
Vimu10g02806 430 MobiDBLite consensus disorder prediction 410 430 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02806 - - var:108321842 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02806 10 39414083 39421224 Vimu10g02806 10 39414083 39421224 ECH