Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02797 ATGCAGAGTCTGCAGCAGAAGGCCTCTGAATGGAGTGGAGTTTCCACAGATGATGCTTTTGCTATCGACGACGGCGATTTGTTTCACACTCTCGGCCTCCAAACCTTCGTTACACTCTCTACCAATTTCTACAACAGGGTATATGATGATGACGAAGAGTGGTTTCGTTCAATATTTGGGAATTCAGACAAGGAAACGGCAATTCAGAACCAGTACGAATTCCTCGTCCAGAGGATGGGAGGTCCTCCTCTCTATTCTCAAAGAAGAGGGCACCCTGCTCTAATTGCTCGACATCGACCATTTCCTGTGACACATGAAGCTGCTGAGAGGTGGCTACATCATATGCGACAAGCATTGGACAGTACCTCAGCTATAGATCATGATTCAAAGATCAAACTCATGAACTTTTTCAGGCACACTGCATATTTCCTTGTGGCTGGAGTTGAGCGAAAGGATCAACACCATCACACACCATGTAAGGATGCTGCCCTGAAGCAACACCCATGTAAAAACTTCTAG 519 0.4605 MQSLQQKASEWSGVSTDDAFAIDDGDLFHTLGLQTFVTLSTNFYNRVYDDDEEWFRSIFGNSDKETAIQNQYEFLVQRMGGPPLYSQRRGHPALIARHRPFPVTHEAAERWLHHMRQALDSTSAIDHDSKIKLMNFFRHTAYFLVAGVERKDQHHHTPCKDAALKQHPCKNF 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02797 172 SUPERFAMILY Globin-like 27 145 IPR009050 -
Vimu10g02797 172 Gene3D Globins 1 151 IPR012292 GO:0019825|GO:0020037
Vimu10g02797 172 Pfam Bacterial-like globin 27 142 IPR001486 GO:0019825
Vimu10g02797 172 CDD TrHb2_AtGlb3-like_O 31 146 - -
Vimu10g02797 172 PANTHER TWO-ON-TWO HEMOGLOBIN-3 1 158 IPR044203 GO:0005344|GO:0015671
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02797 Vimu-Chr10 39359957 39361179 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02797 - - gmx:547753 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02797 10 39359957 39361179 Vimu10g02797 10 39359957 39361179 ECH