Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02794 ATGGGTTGCGCACAGTCTCGAATAGACAACGAGGAATCCGTGTCACGCTGTAAGGACCGCAAGAACTTGATGAAGGACGCCGTCGTGGCTCGCAACGCCTTCGCCGCCGGCCATTCTGGTTACGCCGTCGCACTCAAGAACACCGGCGCCGCCCTCAGCGACTACGCCCTCGGCGAGACACACGACCCCCACCCTCCGCCGCCCCTCGACCCTCCCACCGTCACCTCTGGCCCTCCACCGCCACCCCCGCCGCCCATCGAGGACTCCCTTCCTCCCCCGCCCCCGCCGCTCCCCGAGTTCTCCCCTGTACCGCTCACGCGCGCCGCCACCATGCCCGCTGGCGCCATGCACCACAGCAGCCCCGTTCCGCTCACCATCGCCGAGGAGGAGGAAGAAGAAACCCCCAAGCTGGTGAAGAAAACCGCCGGATCCTTGTCGCCGGAGATGAAGACACCTCCGCCGCCGATGCCGGAGTCTAAGGGCATGGCATGGGATTACTTCTTCATGGTGGACAACATGCCTGGAGCTTCTCTCAATGCTGAAGATGATGATGATGATGATGATAATAACGATAATAACGATAATGGTGATGTTGAGGGTAAATTGGCGAATGTGGTTGAAGACGAGGTTGAGCCTAAAACTCCAGAGAAAGTGCAGGAACATGTACATGAAAACATTCATGAAGAGCATGATGAGATAAGTGAGGCAAAGATGCACATTGAGCATTCTAAAACTGCTCCAGCTGAGTTTAGGAGAGCAATAAAGGTGGTTCCTTCCGTTACTCTGATGCAGATTCTCAGTGTCCTTGATGATCACTTTCTGAAGGCTTCCGAGAGTGCTCAAGAAGTTACCAAGATGCTTGAGGCTACTAGGTTGCATTATCATTCCAATTTTGCTGATAATCGCGGGCACATTGATCATTCTGCTAGGGTTATGCGTGTCATAACTTGGAACAGGTCGTTCAAAGGTGTGTCCAATGGGGATGCTGGGAAAGATGATATTGATTCCGAAGAGTATGAAACTCATGCCACTGTTTTGGACAAGTTGCTGGCCTGGGAAAAGAAACTTTATGAAGAGGTCAAGCAAGGTGAGCTAATGAAGTTCGAGTATCAGAGAAAAGTTGCAATTCTAAACAAGCAGAAGAAGCGTGGTGCCAGCGCTGAATCCTTGGAAAAAACTAAAGCAGCCGTTAGTCATTTGCACACAAGATATATTGTTGATATGCAATCCATGGACTCAACAGTTTCAGAAGTGAACCAGATTCGAGATGCTCAGCTGTATCCAAAACTTGTGGCTCTTGTTATTGAGATGGCAAATATGTGGGAACATATGTGCACATATCATGACAGCCAGCTGAAAATAGTTACGGACCTCAAATCTCTTGATATTTCTCAAGCTCCTAAGGAAACAACAAAGCATCATTACGAACGCACATTGCAACTTTGGAATGTCGTCCAAGAATGGCATTTACAATTTGAGAAGCTTGTGACTCAACAAAAGCATTACATCAAAGCTCTTAACAGTTGGCTAAAATTAAATCTCATCCCTATTGAAAGCAACCTTAAAGAGAAAATATCATCGCCGCCTAAAGTGCAGAATCCGCCAATCCAATACCTTCTCCACGCGTGGCATGATTATGTTGACAAGCTTCCTGATGAGCTTGCCAAATCTGCTATTTCCTCCTTTGCTGCTGTGATAAAGACCATCATACTTCAGCAGGAAGAAGAGATGAAGTTGAAGGAGAGGTGTGAGGAAACCAGAAAGGAATACTTAAAGAAAAAACAAGCCTTTGAGGAATGGTACCAGAAGCATTTACTGCGGAAGGGGCCTGAAGAAGCAGAACATGAAAGGGGAGAGGAAGTGAACACCAACAACCCTGTCTCGGACAGACAATTTGTCGTTGAGAGCTTGCAGAAGAAATTAGAAGAGGAAATTGAATCTCACCAAAAACATTGTGTTCAGGTGCGAGAGAAATCACTACAGTGTTTCAAAACTCGCTTGCCTGAACTCTTCCGTGCTTTATCAGACTATTCTCATGCCTGTTTTGATGCTTATGAGAAACTGAAGTCAATAACACAGTCACGGGGTGGTGGGGCATGA 2100 0.479 MGCAQSRIDNEESVSRCKDRKNLMKDAVVARNAFAAGHSGYAVALKNTGAALSDYALGETHDPHPPPPLDPPTVTSGPPPPPPPPIEDSLPPPPPPLPEFSPVPLTRAATMPAGAMHHSSPVPLTIAEEEEEETPKLVKKTAGSLSPEMKTPPPPMPESKGMAWDYFFMVDNMPGASLNAEDDDDDDDNNDNNDNGDVEGKLANVVEDEVEPKTPEKVQEHVHENIHEEHDEISEAKMHIEHSKTAPAEFRRAIKVVPSVTLMQILSVLDDHFLKASESAQEVTKMLEATRLHYHSNFADNRGHIDHSARVMRVITWNRSFKGVSNGDAGKDDIDSEEYETHATVLDKLLAWEKKLYEEVKQGELMKFEYQRKVAILNKQKKRGASAESLEKTKAAVSHLHTRYIVDMQSMDSTVSEVNQIRDAQLYPKLVALVIEMANMWEHMCTYHDSQLKIVTDLKSLDISQAPKETTKHHYERTLQLWNVVQEWHLQFEKLVTQQKHYIKALNSWLKLNLIPIESNLKEKISSPPKVQNPPIQYLLHAWHDYVDKLPDELAKSAISSFAAVIKTIILQQEEEMKLKERCEETRKEYLKKKQAFEEWYQKHLLRKGPEEAEHERGEEVNTNNPVSDRQFVVESLQKKLEEEIESHQKHCVQVREKSLQCFKTRLPELFRALSDYSHACFDAYEKLKSITQSRGGGA 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02794 699 Coils Coil 638 658 - -
Vimu10g02794 699 Pfam Protein of unknown function (DUF632) 262 567 IPR006867 -
Vimu10g02794 699 MobiDBLite consensus disorder prediction 175 199 - -
Vimu10g02794 699 MobiDBLite consensus disorder prediction 178 193 - -
Vimu10g02794 699 MobiDBLite consensus disorder prediction 61 102 - -
Vimu10g02794 699 PANTHER UNCHARACTERIZED 1 692 - -
Vimu10g02794 699 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vimu10g02794 699 MobiDBLite consensus disorder prediction 128 156 - -
Vimu10g02794 699 Coils Coil 569 589 - -
Vimu10g02794 699 MobiDBLite consensus disorder prediction 55 104 - -
Vimu10g02794 699 SUPERFAMILY Formin homology 2 domain (FH2 domain) 80 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02794 Vimu-Chr10 39342576 39345861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02794 1 96 Acyl Lipid Metabolism Gene Families AT2G27090 35.354 4.89e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02794 - - gmx:100807597 1118.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02794 10 39342576 39345861 Vimu10g02794 10 39342576 39345861 ECH