Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02788 ATGGAAAATCTTCTCCTTCCCATTTTTGCTTTACTCACTCTTGCAGTGGTGGCAACCCATGGTGCTTTGCCTCCTGAAGTTTACCGGAAATCGGTACTTCCTCCTAATACACCAATTCCAAAAGCTGTCACTGATGTTCTTCATCCTGATTTGGTGAACTATGAAAAGGGAAGGGTAAATTATGAAAGTGAAGGGGAGGACTATGGAAAGGGAGGAGAGTACTATGGAAAGGGTAGGGAGTATTATGGAAAGGATGGGAAGTACTATGGAAAGGGTAGGGAGTACTATGAAAAGGGAGGGGAGTACTATGGAAAGGGAGGAGAGAACTATGGAAAGGGAGGAGATGACTATGGAAAGGGAGGAGAGGACTATGGAAAGGGAGGGGATGACTATGGAAATGGAGGAGAGTACTATGGAAAGGGAGGAGAGTACTATGGAAAGGGTAGGGAGTACTATAAAAAGGGAGGAGAGGACTATGGAAAGGGAGGGGAGGACTATGGAAAGGGAGGGGAGTACTATGAAAAGGGTGGAGAGGACTATGGAAAGGGAGGGGAGGACTATGGAAAGGGTGGGGAGTACTATGGAAAGGGAGGGAAAGACTATGGAAAGGAAGGGGATAACTATGGAAAGGGAGGGGAGTACTATGAAAAGGGAAGGGAATACTATAAAAAGGGAGGGAAGTACTATGAAAAAGGAGGGAAGTACTACGGAAAGGGGAGGAAGAACTATGGAAAGGGTGCCCACAATATCATCCTTGGAGGAAAAGGTGGAGTTTTATTTACATACAAACATGCTGCCACAACGAACCAATTACATGATGACACCGCAGTGACACGCTTCTTCAAGGAAAATGACTTGCATTATGGAACAAAAATGGACCTGCACTTCACTCCAAGTTTTAACCAAGTCACCTTCTTGCCACGCCAAGTTGCAGATTCAATACCCTTTTCATCCAGCAAGGTGAACGATGTCTTCATCAAGTTTTCCATCAAACCCGAGTCAGAGGAGGCTAATGTCGTGAAGAACACTCTTAGTGAATGTGAAGAAACCAGTATCAAGGGTGAGGAAAAGTATTGTGCCACTTCACTTGAGTCCATGGTTGATTTCATCACTTCCAAGCTTGGAAAAAACCTTGTGGTTTTGTCCACAGAAGTTAACCAAGATACCGGGTTGCAACAATACACCATAGCACCGGGAGTGAAGAAGATATCAGGAGATAAAGTTGTTGTGTGCCACAAGCAGAATTACCCTTATGCTGTTTTTCACTGCCACAAAACTGAGACCACCAGAACTTACTTTGTGCCTTTGAAGGGTGCTAACGGGATCAAAGTTAAAGCTGTGGCAGTGTGCCACACTGACACATCGCAATGGAACCCCAAACATCTGGCCTTTCAAGTGCTTAAGGTTAAACCAGGAACTGTTCATGTCTGCCACTTTCTTCCTGCGGATCATGTTGTTTGGGTTCAGAAGTAG 1473 0.4501 MENLLLPIFALLTLAVVATHGALPPEVYRKSVLPPNTPIPKAVTDVLHPDLVNYEKGRVNYESEGEDYGKGGEYYGKGREYYGKDGKYYGKGREYYEKGGEYYGKGGENYGKGGDDYGKGGEDYGKGGDDYGNGGEYYGKGGEYYGKGREYYKKGGEDYGKGGEDYGKGGEYYEKGGEDYGKGGEDYGKGGEYYGKGGKDYGKEGDNYGKGGEYYEKGREYYKKGGKYYEKGGKYYGKGRKNYGKGAHNIILGGKGGVLFTYKHAATTNQLHDDTAVTRFFKENDLHYGTKMDLHFTPSFNQVTFLPRQVADSIPFSSSKVNDVFIKFSIKPESEEANVVKNTLSECEETSIKGEEKYCATSLESMVDFITSKLGKNLVVLSTEVNQDTGLQQYTIAPGVKKISGDKVVVCHKQNYPYAVFHCHKTETTRTYFVPLKGANGIKVKAVAVCHTDTSQWNPKHLAFQVLKVKPGTVHVCHFLPADHVVWVQK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02788 490 Pfam BURP domain 280 488 IPR004873 -
Vimu10g02788 490 ProSiteProfiles BURP domain profile. 280 490 IPR004873 -
Vimu10g02788 490 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 17 489 IPR044816 -
Vimu10g02788 490 SMART BURP_2 278 490 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02788 Vimu-Chr10 39271679 39275043 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02788 - - vra:106760384 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02788 10 39271679 39275043 Vimu10g02788 10 39271679 39275043 ECH