LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu10g02775	TTGATGGACTATTGCATAAGAGAAATAGAGGGAAAGCAAGCGCATGACCCTTTGTTCAACAAGGCATCGTCTTCTTCAACGGTGTGGGTTGAAGGGCCTGTGATAGTAGGAGCTGGGCCATCGGGGCTTGCAGCAGCAGCATGTCTCAGAGAGAAAAACATCGAAAGCGTGATTCTAGAAAGATCCAATTGCATAGCTTCTCTGTGGCAGCTCAAGACTTATGATCGCCTGCGCCTTCACCTACCAAAGCAATTCTGCGAGCTTCCCTTCATGCCCTTCCCTTCTCACTTCCCCACATACCCTTCCAAGCAGCAGTTCGTCGAGTACTTGGAAACTTACGCGCAAACCTTCAAGATTAAGCCAACCTTCAATGAGACGGTGAAGCATGCAGAGTTTGACGCCAAACTCGCGCTGTGGCGGGTCAAGACTGCCGACAAGGCGGAGAACACCACGGAGTACTTGTGCCGGTGGCTGATCGTGGCCACCGGCGAGAATGCCGAGGCGGTGGTGCCGGATATCGAAGGGGTAGAAGAGTTTGGTGCGCCCATAAGACACACGAGTTTGTATAAGAGTGGAGAAGAGTTCAGAGAGAAAAGGGTTTTGGTGGTGGGGTGTGGAAATTCTGGCATGGAGGTTTGCTTGGATCTTTGCAACCATAATGCTACTCCTTCACTTGTCGTCAGAGACACAGTACACGTCCTACCACGAGAGATGCTGGGAAAATCAACTTTCGGGTTGTCCATGTGGTTGCTGAAATGGTTACCCATGCGACTTGTCGATCGATTCTTGCTAATGGTGTCATGGCTTATGCTGGGTGACACTTCTGAATTGGGATTGGATCGACCGTGTTTGGGTCCCCTCGAACTCAAAAACATGTCAGGAAAGACCCCTGTGCTAGATGTGGGTACCCTTGCCAAGATTAAAGGTGGAGACATTAAGGTGCGTCCAGGGATTAAGCGACTTAAACGTCACACAGTGGAATTTGTGGATGGAAGGACAGAGAATTATGATGCAATCATATTGGCGACTGGTTACAAAAGCAATGTGCCCTATTGGCTTAAGGAAGAAGATATGTTCTCCAAGGAAGATGGGTACCCTGTGACGCCATTTCCGAATGGGTGGAAAGGTAAAAATGGTCTCTATGCTGTGGGTTTTACCAAAAAGGGACTACTGGGTGCATCCATGGATGCAAAGAGAATAGCTCAAGACATTGAACGGTGTTTTGAAGCTGAGGCAAATCATCGAACAGCTTTTGCGCGCTCTCACTTGCCGCAACCAAATTCATAG	1287	0.4895	MMDYCIREIEGKQAHDPLFNKASSSSTVWVEGPVIVGAGPSGLAAAACLREKNIESVILERSNCIASLWQLKTYDRLRLHLPKQFCELPFMPFPSHFPTYPSKQQFVEYLETYAQTFKIKPTFNETVKHAEFDAKLALWRVKTADKAENTTEYLCRWLIVATGENAEAVVPDIEGVEEFGAPIRHTSLYKSGEEFREKRVLVVGCGNSGMEVCLDLCNHNATPSLVVRDTVHVLPREMLGKSTFGLSMWLLKWLPMRLVDRFLLMVSWLMLGDTSELGLDRPCLGPLELKNMSGKTPVLDVGTLAKIKGGDIKVRPGIKRLKRHTVEFVDGRTENYDAIILATGYKSNVPYWLKEEDMFSKEDGYPVTPFPNGWKGKNGLYAVGFTKKGLLGASMDAKRIAQDIERCFEAEANHRTAFARSHLPQPNS	428

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu10g02775	428	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	32	54	-	-
	Vimu10g02775	428	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	195	219	-	-
	Vimu10g02775	428	Pfam	Flavin-binding monooxygenase-like	35	352	IPR020946	GO:0004499\|GO:0050660\|GO:0050661
	Vimu10g02775	428	SUPERFAMILY	FAD/NAD(P)-binding domain	196	406	IPR036188	-
	Vimu10g02775	428	FunFam	Flavin-containing monooxygenase	33	413	-	-
	Vimu10g02775	428	PRINTS	FAD-dependent pyridine nucleotide reductase signature	33	52	-	-
	Vimu10g02775	428	PRINTS	FAD-dependent pyridine nucleotide reductase signature	199	217	-	-
	Vimu10g02775	428	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	34	418	-	-
	Vimu10g02775	428	SUPERFAMILY	FAD/NAD(P)-binding domain	34	232	IPR036188	-
	Vimu10g02775	428	Gene3D	-	33	414	IPR036188	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu10g02775	Vimu-Chr10	39099785	39103748	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu10g02775	K11816		-	gmx:100799546	785.023