Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02773 AACCAGATAACGAAAAACAGTGAAATGGTCCTTCTTCTTCACCTTCCAAGGTTCCCTCTCTACTTGATTACTTCATCTCACTCCCTTCGTCTCCGAGCCCTCTCAACTTCCTCCAAAACCACCCTCTTACGCCCACCCAAAGCCACGCTCACCACCTCACAACCCGTGACCGTAACAAACCCTTCCGCAACAGAACTATCCCTCGAGAAGCTCTTCGTTCCGCCGGGGACCAACGTGTCTCTCGACTCCGCGAGAGTGTTGAACGGTTCCAACATTCTTCTCAGCAACTACGCCAACGACGCTCTGATATCGCAGGCCGAATTCGTGAAAAGCAGTGTGAAAACCGAAGACTGCCCCTCTGATGGCCTCCCTGAATTTGCTCTCGTTGGCCGCTCCAATGTCGGCAAATCCTCCCTCCTCAACTCTCTCGTGCGCCGCAAGAAGCTCGCCTTAACTTCCAAGAAACCTGGCAAAACACAATGCATTAACCATTTTCGGATTAATGATAGCTGGTACCTGGTTGATTTGCCTGGATATGGGTATGCATCTGCACCGCATGAACTTAGAATGGACTGGGCAAAATTCACCAAGGACTATTTCCTTAACCGTTCAACATTAGTTTCAGTATTCCTTCTAATAGATGCTAGCATTCCTGCTAAACAAATCGATCTTGACTATGCCAGTTGGTTGGGTCAGAATCAGATCCCAATGACAATAATCTTTACCAAATGTGACAAGCGGAAGAAGAAAAAAAACGGAGGCAAAAGACCAGAGGAAAATGTTGATGATTTTCAGGACTTGATTCGAGGTTTCTTCCAATCAGTGCCTCCGTGGATCATGACCAGTAGTGTCACCCATCAGGGTCGTGATGAAATACTTCTCCACATGGCCCAGCTACGGAACTATTGGCTTAAGCACTAA 921 0.4767 NQITKNSEMVLLLHLPRFPLYLITSSHSLRLRALSTSSKTTLLRPPKATLTTSQPVTVTNPSATELSLEKLFVPPGTNVSLDSARVLNGSNILLSNYANDALISQAEFVKSSVKTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINDSWYLVDLPGYGYASAPHELRMDWAKFTKDYFLNRSTLVSVFLLIDASIPAKQIDLDYASWLGQNQIPMTIIFTKCDKRKKKKNGGKRPEENVDDFQDLIRGFFQSVPPWIMTSSVTHQGRDEILLHMAQLRNYWLKH 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02773 306 Hamap Probable GTP-binding protein EngB [engB]. 111 300 IPR019987 GO:0005525
Vimu10g02773 306 CDD YihA_EngB 125 299 IPR030393 GO:0005525
Vimu10g02773 306 Gene3D - 97 302 IPR027417 -
Vimu10g02773 306 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 302 IPR027417 -
Vimu10g02773 306 NCBIfam ribosome biogenesis GTP-binding protein YihA/YsxC 106 294 IPR019987 GO:0005525
Vimu10g02773 306 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 122 302 IPR030393 GO:0005525
Vimu10g02773 306 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 38 306 - -
Vimu10g02773 306 Pfam 50S ribosome-binding GTPase 126 243 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02773 Vimu-Chr10 39071760 39074500 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02773 K03978 - gmx:100784426 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02773 10 39071760 39074500 Vimu10g02773 10 39071760 39074500 ECH