Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02768 ATGTCAATGCGTTTATCCTTAGCACCGCTTGTTGTGAAAGTAGATCCGAATTTAAATGTTATTTTGACTGCTTGTCTCACTGTGTTCGTGGGATGTTACCGCTCTGTCAAATCAACCCCACCAACTGAGACAATGTCGAATGAACATGCCATGCGTTTCCCCTTTGTTGGGAGTGCGATGTTATTGTCACTGTTCTTACTCTTCAAGTTTCTATCAAAGGACTTGGTGAACACTGTATTGACAGGCTACTTCTTTGTACTTGGGATTGTTGCGCTTTCGGCAACATTACTACCGTTTATTAAACGTTTTCTGCCAAAGCATTGGAATGAGGACGTCATAGTCTGGCGATTTCCATATTTCCGATCTGTGGAGATTGAGTTTACAAAGTCACAAGTCGTTGCTGGAATCCCTGGGACATTCTTTTGTGCTTGGTATGCTTTGCGGAAGCATTGGCTGGCAAATAATATATTGGGTCTTGCTTTCTGTATTCAGGGAATTGAAATGCTTTCTCTTGGGTCTTTCAAGACTGGTGCTATTCTCTTGGCTGGTCTATTTGTATATGACATATTCTGGGTTTTCTTCACTCCAGTAATGGTCAGCGTTGCAAAATCATTTGATGCTCCAATAAAGCTTTTGTTCCCCACAGCAGATGCTGTAAGGCCATTTTCAATGCTTGGACTTGGTGATATTGTTATCCCTGGTATTTTTGTAGCATTGGCTTTGCGGTTTGATGTATCCAGAGGAAAACAGCCCCAATATTTCAAGAGTGCATTTTTAGGATACACTGTTGGTTTGGTCCTTACAATTGTTGTGATGAACTGGTTTCAGGCTGCACAGCCTGCTCTTTTGTATATTGTACCTTCTGTAATTGGATTCTTGGCTGCTCATTGCATATGGAATGGTGATGTCAAACAGTTGTTGGAGTTCGATGAGTCAAAGACTGCCAATTCACCTCAAGAGCATGACAAGTCCAGCAAAAAGGTTGAATAA 990 0.4152 MSMRLSLAPLVVKVDPNLNVILTACLTVFVGCYRSVKSTPPTETMSNEHAMRFPFVGSAMLLSLFLLFKFLSKDLVNTVLTGYFFVLGIVALSATLLPFIKRFLPKHWNEDVIVWRFPYFRSVEIEFTKSQVVAGIPGTFFCAWYALRKHWLANNILGLAFCIQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADAVRPFSMLGLGDIVIPGIFVALALRFDVSRGKQPQYFKSAFLGYTVGLVLTIVVMNWFQAAQPALLYIVPSVIGFLAAHCIWNGDVKQLLEFDESKTANSPQEHDKSSKKVE 329
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02768 329 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Vimu10g02768 329 SMART psh_8 41 300 IPR006639 GO:0004190|GO:0016020
Vimu10g02768 329 PANTHER SIGNAL PEPTIDE PEPTIDASE 18 322 IPR007369 GO:0004190|GO:0016020
Vimu10g02768 329 Pfam Signal peptide peptidase 39 312 IPR007369 GO:0004190|GO:0016020
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu10g02768 Vimu-Chr10 39027929 39033045 Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02768 K09595 - gmx:100784956 624.78