Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02762 ATGGCGAACCAGGACTACGAAGAGCGCCCACAAACGCAGGAGCTCGGGTACGACCCGAACTTCGTCCCGGACTCTGTGAAATCGTTCGTCGTTCACCTGTACCGTCACATCCGCGAGAAGAACGTGTACGAGATCCACCAGATGTACGAGAGTTCGTTCCAGACCCTGTCGGAGCGGCTCTTCAAGGACACGCCGTGGCCCTCCGTGGACGCCGTGGCGCATTACGTGGATAACGACCACGTTTTTTGCCTCCTCTACCGCGAGATGTGGTTCCGCCACCTCTACGCGCGCCTCACGCCCACGCTCCGCCAGCGCATCGACTCCTGGGACAACTACTGCAGCCTTTTCCAGGTGGTCCTCCACGGTGTCGTAAACATGCAGCTCCCCAACCAGTGGCTGTGGGACATGGTCGACGAGTTCGTCTACCAGTTCCAGAGCTTCTGCCAATACCGTGCCAAGATGAAGAACAAGACCGAACAGGAGATCGCGCTCTTGCGCCAGTTCGACCAGGCCTGGAATGTGTATGGGGTTTTGAACTTCCTTCAGGCGCTGGTGGAGAAGAGTACCATTATTCAGATTCTGGAGCAGGAGAAGGAGGGGCTCGAACAGTTTACTGCCACGGATGGGTATGATTACAATGGGGGGAGTAATGTGTTGAAGGTGCTGGGGTATTTTAGTATGGTGGGGTTGCTTAGGGTTCATTGCTTGCTGGGGGATTATCATACTGGGATTAAGTGTTTGCTTCCTATTGATATTAGTCAGCAAGGGGTTTATACCAGTGTTATTGGGAGTCACATCACCACCATTTATCACTATGGTTTTGCCAATCTCATGCTCCGCAGTGAATGTCTCTGGTCTTTGCTTGTGAAAGACAGTGAATGGACTTTACCATCTAAAGATTCTAATCCATTTCAGGCACTTTACCCTGACCTAATCAATTACCTTTTTTACAGATATGTGGAAGCAATTCGAGAATTTAACAAAATTCTCTTGTACATCTTCAAGACAAAACAGTATCACCAGAAATCGCCCCAGTATGAGCAGATACTGAAGAAAAATGAACAAATGTATGCCTTGCTGGCAATTTGTCTTTCACTCTGTCCCCAAACCAGGCTTGTTGATGAAACTGTGAACTCTCAGTTACGGGAGAAGTATGGTGAAAAGATGGCTAGAATGCAGCGATATGACGATGAGGCATTTGCTATCTATGATGAGCTCTTCTCCTATGCATGCCCTAAGTTCATTACCCCTTCAGCTCCTAGTTTTGAGGAGCCTCTTGTAAATTATAATCAGGATGCCTATAGACTTCAATTAAAACTGTTCCTTTATGAAGCAAAGCAGCAGCAGTTGTTATCAGGTGTCCGGACCTTCTTGAAAGTGTATTCAACAATCTCTTTTGCAAAACTTGCGAGTTACATGGAAGTGGATGAACCCACCTTAAGGACTATCTTGATCACATACAAGCACAAGACACATGCTGTTGATAGTGATGGGAAAATTACATCCAATGCCGATGTAGATTTCTATATCGATGAGGTTCAAGTCTTAGCTTTGACCACCATATGCATTACGGAGTCAGTGGACACAATTCATGTTGTGGAGTCGAAGCCTGCGAAACGTTATGGTGATTACTTTTTGCGTCAGATTGTCAAGCTTGAAGGGGTGATCAATGAGATGGACGTTCATATGATTTTCAGTCTCAAGGAGTTTAACTCTGGAAGTTCTCCTGTTTCTAAAATAGTGCGTGCAAATGTTGAACATAGTTTCAATTTGCTGCAGGACACAATTCATGTTGTGGAGTCCAAGCCTGCGAAACCTTATGGTGATTACTTTTTGCGTCAGATTGTCAAGCTATCTTATTACGTTAATTACTTTAGTTTATGTTCTTCCCTTCCCCTTTCATCTACCTCGATCTTCTTGAACATCCTTTGTTCTCCCAAACCCCTCGTTTTCTTCATGGGGGTATCCTCCAATCCCAAAGTCTTTCTCTCTGACAAAGATCTCAAAGGGGCCAACTTCGTCGATCCAGAACTGGGGTTATTGGTACCCAACGAGGGGTGCCAAATTTTTATCCAAGAAGATCACCACCTTTTCAAACTCAAACACCTATCGGTGCAAGAACGTCACCAACAGCAACAAGACAACAAGGATCGCCATTAA 2160 0.4606 MANQDYEERPQTQELGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYESSFQTLSERLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQFDQAWNVYGVLNFLQALVEKSTIIQILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGIKCLLPIDISQQGVYTSVIGSHITTIYHYGFANLMLRSECLWSLLVKDSEWTLPSKDSNPFQALYPDLINYLFYRYVEAIREFNKILLYIFKTKQYHQKSPQYEQILKKNEQMYALLAICLSLCPQTRLVDETVNSQLREKYGEKMARMQRYDDEAFAIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVYSTISFAKLASYMEVDEPTLRTILITYKHKTHAVDSDGKITSNADVDFYIDEVQVLALTTICITESVDTIHVVESKPAKRYGDYFLRQIVKLEGVINEMDVHMIFSLKEFNSGSSPVSKIVRANVEHSFNLLQDTIHVVESKPAKPYGDYFLRQIVKLSYYVNYFSLCSSLPLSSTSIFLNILCSPKPLVFFMGVSSNPKVFLSDKDLKGANFVDPELGLLVPNEGCQIFIQEDHHLFKLKHLSVQERHQQQQDNKDRH 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02762 719 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 6 554 IPR019382 GO:0003743|GO:0005737|GO:0005852
Vimu10g02762 719 ProSiteProfiles PCI domain profile. 325 524 IPR000717 -
Vimu10g02762 719 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 6 280 IPR019382 GO:0003743|GO:0005737|GO:0005852
Vimu10g02762 719 Coils Coil 378 398 - -
Vimu10g02762 719 Pfam RNA polymerase I-associated factor PAF67 104 280 IPR019382 GO:0003743|GO:0005737|GO:0005852
Vimu10g02762 719 Pfam RNA polymerase I-associated factor PAF67 316 551 IPR019382 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02762 Vimu-Chr10 38962034 38967805 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02762 K15029 - gmx:100804691 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02762 10 38962034 38967805 Vimu10g02762 10 38962034 38967805 ECH