Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02750 ATGCAAATAAGTTGTCCTAACTTGGAGATTCAAGCCTACCTTTCTATCCGAAACACTAGAACAGGACGGTGTTGTTTTAGATTTATGATTGCATGTAGTAATTTAGCCAACAGAATTATTCAGACTTGTCCAGCTTACCCTGTGAACATTCCTCATAAAAACCTGAAAGCTGACAAGGATGATTTGATCCTTGTTTTTGGTAAAGGCAGTCTCCATGCTGTTTCCGGCATAGATGGTGAAGTTCTCTGGAGGAAAGATTTTGCAGGTGAAAGCAGCATTGAGGTTAGCCATATTATTCAGTCCACTGACAAGATCTATGCTGCTGGTTTTGTTGGATCTTCAAAGTTTTATGTTTATGGATTGAATGCTGATACTGGAAAATTGCTCAAGGATGATCACACAATACTTCCCTGTGATACTTTTGGGGAATTATTATCTGTCTCAGGTGATAAGTTTGTGGTACTGGATAAGATGAGGTCTAAGATATTGACGATAAACATCAAGAATGGAGAGATTAGTTACAAACAGAAGCTCATTTCAGACCTCATCAAGGATTCATCTGGACAGGCAGTGATATTACCATCAAGGCTCCCTGAATTGTTTGCATTGCGTATTGACTCCCATGTTCTTACAATTAAAGTGACAAATGAAGATGACTTGGTGCTGGTGGACAAAATTAATAATGCAGCGGCTGTTAGTGATGCTCTGTCAATCTCAGAGGGTCAACATGCTTTTGCATTTATTCAACATGAAGGCAGTAATATTCACCTCTTTGTAAAGGACGTTAATGATTGGAATGGTGATTTACTCAAGGAAAGTATAGTAATAGACCATCAAAGAGGGAACATTGAGAAGATTTTTATAAACAATTATGTGAGGACAGATAGATCGTACGGTTTTAGAGCATTGATGGTAATGGAAGATCATTCGCTATTATTAGTACAACAAGGAGAAATTGTCTGGAGTAGAGAGGATGGTCTTGCATCAGTTGTAGATGTCACAACGTCTGAACTACCTGTGGAAAAGGAAGGTGTGTCGGTGGCAAAAGTGGAACAGAACCTCTTTGAATGGCTTAAGGGACATGTGCTGAAGCTCAAAGGAACTTTAATGATTGCAAGCCCTGAGGATGTAGTCGCTATTCAAGCGCTAAGATTAAGGAGTTCTGAGAAAAGCAAAATGACTCGTGATCATAATGGTTTTCGTAAGTTGCTTATAGTACTTACAAGGGCAGGAAAGGTTTTTGCTTTGCACACTGGAGATGGTCGTGTAGTTTGGTCTATTCTTCTTCATACACTGCGTAAAACAGAAGTGTGTGAACATCCCGTTGGGCTTAACATTTATCAGTGGCAGGTTCCGCATCATCATGCCTTGGATGAGAATCCATCTATCCTTGTAGTTGGGCGATGTGGGCCAAGTTTGGCTGCACCGGCTGCTCTTTCTTTTATTGATGCATACACAGGGAAGGAACTCAATTCTTTGAGACTTGCTCATACCATTGCTCAAGTTATTCCTCTGCCTTATACCGATTCAACTGAACAGCGTCTGCATCTAATTATAGACACAGACCAACATGCATACCTATACCCAAGAACTCCTGAAGCTATTGGCATTTTGCAACGTGAGTTTTCAAATGTGTACTGGTACTCAGTTGAGGCTGATAATGGTATTGTCAGAGGTCATGCCTTGAAGAGTAATTGCATTCACCAAATAGTTGATGAGTACTGCTTTGATTTCCGGGATTTATGGTCTATTGTATTCCCATCTGAATCAGAAAAGATTATCGCAACTGTAACCAGAAAATCGAATGAGGTTGTTCATACTCAAGCAAAAGTTATGACTGACTATGATGTCATGTATAAGTATGTATCGAACAATATACTTTTTGTCGCAAATGCAGCACCTAAAGCCACAGGGGAAATTGGAACAGCCACCCCTGAGGAGGCTTGGTTGGTCATCTATATCATTGATACCGTGACTGGTCGTATATTGCATAGAATGACACATCATGGTTGCCAGGGTCCTGTTCATGCGGTATTTAGTGAAAACTGGGTTGTCTATCACTATTTTAATCTCAGAGCACACAGATACGAGGTGTCAGTTATTGAGGTCTATGATCAGTCTCGAGCGGATAACAAAGATGTCTGGAAGTTTGTTCTTGGGAAGCATAACCTTACATCACCCATTTCTTCTTATTATCGACCAGAAATTACAACAAAATCACAGTCGTACTTTTTTACCCATTCTGTGAAAGCAATAGAAGTGACTTTGACATCCAAGGGTATAACTTCTAAGCAGCTTCTTATTGGAACAATTGGTGATCAGGTTTTGGCACTTGATAAACGCTTTTTGGATCCCCGGCGCACTCTTAATCCCTCGCAAGCTGAGAAAGAGGAAGGAATTATTCCTCTGACCGATTCATTGCCCATCATATCTCAGTCCTATATTACACATTCCCTTAAAGTGGAAGGTCTGCGAGGCATCGTAACAGTGCCTGCCAAGCTGGAGTCTACATCCCTCGTCTTTGCCTACGGAGTAGATCTATTTTTTACTCAGATTGCTCCTTCTAGGACTTACGATTCATTAACTGAAGATTTCAGCTATGCTCTACTTCTTCTAACAATTGTTGCACTTGTGGCTGCAATATTTGTCACTTGGGTATTATCCGAGAGGAAAGATCTACAAGAGAAATGGAAATGA 2697 0.4042 MQISCPNLEIQAYLSIRNTRTGRCCFRFMIACSNLANRIIQTCPAYPVNIPHKNLKADKDDLILVFGKGSLHAVSGIDGEVLWRKDFAGESSIEVSHIIQSTDKIYAAGFVGSSKFYVYGLNADTGKLLKDDHTILPCDTFGELLSVSGDKFVVLDKMRSKILTINIKNGEISYKQKLISDLIKDSSGQAVILPSRLPELFALRIDSHVLTIKVTNEDDLVLVDKINNAAAVSDALSISEGQHAFAFIQHEGSNIHLFVKDVNDWNGDLLKESIVIDHQRGNIEKIFINNYVRTDRSYGFRALMVMEDHSLLLVQQGEIVWSREDGLASVVDVTTSELPVEKEGVSVAKVEQNLFEWLKGHVLKLKGTLMIASPEDVVAIQALRLRSSEKSKMTRDHNGFRKLLIVLTRAGKVFALHTGDGRVVWSILLHTLRKTEVCEHPVGLNIYQWQVPHHHALDENPSILVVGRCGPSLAAPAALSFIDAYTGKELNSLRLAHTIAQVIPLPYTDSTEQRLHLIIDTDQHAYLYPRTPEAIGILQREFSNVYWYSVEADNGIVRGHALKSNCIHQIVDEYCFDFRDLWSIVFPSESEKIIATVTRKSNEVVHTQAKVMTDYDVMYKYVSNNILFVANAAPKATGEIGTATPEEAWLVIYIIDTVTGRILHRMTHHGCQGPVHAVFSENWVVYHYFNLRAHRYEVSVIEVYDQSRADNKDVWKFVLGKHNLTSPISSYYRPEITTKSQSYFFTHSVKAIEVTLTSKGITSKQLLIGTIGDQVLALDKRFLDPRRTLNPSQAEKEEGIIPLTDSLPIISQSYITHSLKVEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSRTYDSLTEDFSYALLLLTIVALVAAIFVTWVLSERKDLQEKWK 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02750 898 Pfam ER membrane protein complex subunit 1, C-terminal 680 897 IPR011678 -
Vimu10g02750 898 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 59 680 IPR011047 -
Vimu10g02750 898 PANTHER UNCHARACTERIZED 53 898 IPR026895 GO:0072546
Vimu10g02750 898 Gene3D - 12 245 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02750 K23562 - gmx:100790095 1562.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02750 10 38869122 38875635 Vimu10g02750 10 38869122 38875635 ECH