Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02747 ATGGAGGAAGCAAAGGGACTCGTGAAACACATAGTGCTCGCAAAGTTCAAGGACGATGTCACTCCCGAGAAGATTGAAGAACTCATCAATGCCTATGCGAATCTAGTCAATCTTATCCCACCCATGAAATCCTTCCATTGGGGTAAAGATGTGAGTGCTGAAAACCTGCATCAAGGCTTCACTCATGTGTTTGAATCAACCTTTGAGAGTACAGAAGCCATTGCAGAGTATGTAGCTCATCCTACTCATGTTGAGTTTGGAAATCTGTTACTTTCCAATCTGGACAAAATACTTGTGATTGATTATAAACCTACCAGTTAA 321 0.4143 MEEAKGLVKHIVLAKFKDDVTPEKIEELINAYANLVNLIPPMKSFHWGKDVSAENLHQGFTHVFESTFESTEAIAEYVAHPTHVEFGNLLLSNLDKILVIDYKPTS 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02747 106 SMART Dabb_2 8 104 IPR013097 -
Vimu10g02747 106 Pfam Stress responsive A/B Barrel Domain 8 103 IPR013097 -
Vimu10g02747 106 ProSiteProfiles Stress-response A/B barrel domain profile. 8 102 IPR013097 -
Vimu10g02747 106 Gene3D - 1 106 - -
Vimu10g02747 106 PANTHER - 6 105 IPR044662 -
Vimu10g02747 106 FunFam Stress-response A/B barrel domain-containing protein HS1 1 106 - -
Vimu10g02747 106 SUPERFAMILY Dimeric alpha+beta barrel 8 104 IPR011008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02747 Vimu-Chr10 38843852 38844671 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02747 - - gmx:100305974 189.119