Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02736 ATGCTTCATGCTTTGTATTTCAAAAGGAAAAATGACGGCTGCTACACCATATTCTACAACAACAGATACGTTCAAACTGTAACATACAACCTTGAGAAACAAAGTACTAACCCTTTGTTTCTCCCTGCAGTAAAAGGAGATTCATTGGCCGTTATGTGTTCTATGCTTCTAAACTGGCTGAGATTCGGAAAACTGAATAAGGATTACAGCAACACCAATGTGTTTGAGCATTCAAACAAGTTCTACTCGGTTTCGGAGAATCACATCCCACAAGAGATTGACATCTTCACACTGAATACTTTAAAATACTGGGATGTCAATGGCGCATGGAATCGTCCCTTTGCAAGTCACCCCAAGAAAGTTCTGGGTACTGGAGAACTAGTTATTTTTGGTGTAGATGCAACTAAACCTTATCTTGAAATTGGAATAGTATCGGCTGAAGGAAACGAGCTGGTTCACAAAGCAGATATAAAACTAGACAGAAGCAGTTTATGCCATGACATAGGTATCACAAGCAGGTATATAGCGATATTGGATTTTCCACTGATAGTTGATTCAAACAGACTACTTAGAAGAGGCCAATTAATCAAATTCGACAAGGAGAAATATGCCAGGATTGGGATAATGCCGCTCTATGGTGATGCTAACTCAATAAAGTGGTTTGAGGTGGAACCTAATATCACATTTCATCTCATCAATTCCTTTGAGGATGGTCATGAGGTTGTGTTGTGGGGTTGTAGAGCACTAGATTCAATAATTCCAGGACCTGAAGATGGTTTGAAGGAATCTAAGTTATTCTCTCGATGTTACGAATGGAGATTAAACATGAAAAGTGGAGAGGTTAAGGAAAAATATCTCACTGGACCAGAACAATATATGGATTTTCCAATGATCAATGCAAGTTTTACAGGAATTAAGAACAGATACGCATACACCCAAGTGGTTGATCCCACTGAAAGTTTTGCTGCAGATATTCCCAAATACGGAGCTTTAGCAAAGCTATACTTTGAAGAACCATGTTCAGAATTCCCTGTGGGAGAGGCACGACAAGAAGAGCTTATAAGGGTGGAATATCATAGGTTTGAAAAAGATGTATTTTGCACTGGATCTGCGTTTGTCCCTAAGGAAGGTGGCGTTGAAGAAGATGATGGTTGGATAATCACTTTTGTTTACAATGAAGATAATGGCATTTCTCAAGTTCATATAGTTGACACGAAGAAGTTTTCAGGAGAGGCAGTTGCCAAAATTACAATACCTTGCAGAGTTCCATATGGATTTCACGGAGCTTTCATGCCAATCTCATTTTAG 1308 0.3907 MLHALYFKRKNDGCYTIFYNNRYVQTVTYNLEKQSTNPLFLPAVKGDSLAVMCSMLLNWLRFGKLNKDYSNTNVFEHSNKFYSVSENHIPQEIDIFTLNTLKYWDVNGAWNRPFASHPKKVLGTGELVIFGVDATKPYLEIGIVSAEGNELVHKADIKLDRSSLCHDIGITSRYIAILDFPLIVDSNRLLRRGQLIKFDKEKYARIGIMPLYGDANSIKWFEVEPNITFHLINSFEDGHEVVLWGCRALDSIIPGPEDGLKESKLFSRCYEWRLNMKSGEVKEKYLTGPEQYMDFPMINASFTGIKNRYAYTQVVDPTESFAADIPKYGALAKLYFEEPCSEFPVGEARQEELIRVEYHRFEKDVFCTGSAFVPKEGGVEEDDGWIITFVYNEDNGISQVHIVDTKKFSGEAVAKITIPCRVPYGFHGAFMPISF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02736 435 PANTHER BETA-CAROTENE DIOXYGENASE 1 431 IPR004294 GO:0016702
Vimu10g02736 435 Pfam Retinal pigment epithelial membrane protein 1 432 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02736 Vimu-Chr10 38750965 38753498 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02736 - - gmx:100817207 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02736 10 38750965 38753498 Vimu10g02736 10 38750965 38753498 ECH